C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: brain expressed myelocytomatosis oncogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000061483 Bmyc-001 ENSMUSG00000049086 10090 + 2:25706739-25707721 protein_coding

Mus musculus EnsemblGRCm38

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000061483
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000061483 23.339±5.79 36.929±3.71 18.449±1.31 31.322±10.74 27.421±15.50 13.792±0.73 7.640±2.56 5.661±0.45 2.888±1.01 15.030±1.75 4.816±0.75 27.587±6.93 6.987±2.38 2.501±0.91

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000165 IEA MAPK cascade
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0005515 IPI protein binding
GO:0005654 IEA nucleoplasm
GO:0005730 IEA nucleolus
GO:0005819 IDA spindle
GO:0006338 IEA chromatin remodeling
GO:0006879 IEA cellular iron ion homeostasis
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0007050 IEA cell cycle arrest
GO:0008134 IEA transcription factor binding
GO:0008284 IEA positive regulation of cell proliferation
GO:0010332 IEA response to gamma radiation
GO:0010468 IEA regulation of gene expression
GO:0032204 IEA regulation of telomere maintenance
GO:0032403 IEA protein complex binding
GO:0034644 IEA cellular response to UV
GO:0035690 IEA cellular response to drug
GO:0042493 IEA response to drug
GO:0043234 IEA protein complex
GO:0043280 IEA positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0045656 IEA negative regulation of monocyte differentiation
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0048146 IEA positive regulation of fibroblast proliferation
GO:0048147 IEA negative regulation of fibroblast proliferation
GO:0050679 IEA positive regulation of epithelial cell proliferation
GO:0051276 IEA chromosome organization
GO:0051782 IEA negative regulation of cell division
GO:0060070 IEA canonical Wnt signaling pathway
GO:0070491 IEA repressing transcription factor binding
GO:0070888 IEA E-box binding
GO:2000573 IEA positive regulation of DNA biosynthetic process
GO:2001022 IEA positive regulation of response to DNA damage stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000024104 mycn-001 protein_coding Danio_rerio 0.0000000006 69
ENST00000259523 MYC-002 protein_coding Homo_sapiens 0 230
ENST00000372451 MYCLP1-001 processed_pseudogene Homo_sapiens 0.00000003 64
ENST00000372815 MYCL-002 protein_coding Homo_sapiens 0.0000000001 73
ENST00000372816 MYCL-004 protein_coding Homo_sapiens 0.00000000008 73
ENST00000377970 MYC-006 protein_coding Homo_sapiens 0 230
ENST00000397332 MYCL-001 protein_coding Homo_sapiens 0.0000000002 73
ENST00000450953 MYCL-003 protein_coding Homo_sapiens 0.00000000002 73
ENST00000517291 MYC-003 protein_coding Homo_sapiens 0 230
ENST00000520751 MYC-005 protein_coding Homo_sapiens 4e-25 119
ENST00000524013 MYC-004 protein_coding Homo_sapiens 0 230
ENST00000613283 MYC-201 protein_coding Homo_sapiens 0 230
ENST00000621592 MYC-001 protein_coding Homo_sapiens 0 230

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