C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397332 MYCL-001 ENSG00000116990 9606 - 1:39895426-39902013 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000397332
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000397332 0.081±0.00 0.454±0.00 0.775±0.00 0.577±0.00 1.367±0.11 0.181±0.00 1.548±0.00 1.031±0.00 1.065±0.53 4.779±3.63 0.730±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JL CIL_0004JL_0002 CGP 1:39841022-39902256
CIL_0004JK CIL_0004JK_0003 CGP 1:39895426-39969968

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 TAS DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106252 Mycl-002 protein_coding Mus_musculus 0 2372
ENSMUST00000030407 Mycl-001 protein_coding Mus_musculus 0 2106
ENSMUST00000147259 Mycl-005 processed_transcript Mus_musculus 0 586
ENSMUST00000135925 Mycl-004 processed_transcript Mus_musculus 0 544
ENSMUST00000144998 Mycl-003 protein_coding Mus_musculus 0 309
ENSMUST00000061483 Bmyc-001 protein_coding Mus_musculus 0.0000000002 73

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