C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C1q-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000061545 C1ql3-001 ENSMUSG00000049630 10090 - 2:13003457-13011747 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000061545
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000061545 0.064±0.04 0.048±0.02 0.304±0.00 11.309±12.79 0.595±0.22 0.180±0.04 0.028±0.01 0.577±0.40 0.097±0.04 0.106±0.05 0.219±0.06 0.088±0.04 0.050±0.05 0.022±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002W6 CIL_0002W6_0002 CGP 2:12924041-13011747
CIL_00045Y CIL_00045Y_0003 CGP 2:13003457-13271431

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005576 IDA extracellular region
GO:0005581 IEA collagen trimer
GO:0050807 IDA regulation of synapse organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298943 C1QL3-001 protein_coding Homo_sapiens 0 2924
ENST00000619991 C1QL3-201 protein_coding Homo_sapiens 0 789

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