C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00045Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000010350-ENSDARG00000045279 CGP 7955 24:33145703-33231007
GeneTranscriptPositionBiotype
ENSDARG00000010350 (c1ql3a)
complement component 1, q subcomponent-like 3a 		ENSDART00000016879 (c1ql3a-201) 33145703-33147815 protein_coding
ENSDARG00000045279 (rsu1)
Ras suppressor protein 1 		ENSDART00000131094 (rsu1-201) 33153256-33230742 protein_coding
ENSDART00000136731 (rsu1-001) 33187786-33231007 protein_coding
CIL_00045Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165985-ENSG00000148484 CGP 9606 10:16513743-16817528
GeneTranscriptPositionBiotype
ENSG00000148484 (RSU1)
Ras suppressor protein 1 		ENST00000345264 (RSU1-001) 16590611-16817528 protein_coding
ENST00000377911 (RSU1-003) 16593313-16817463 processed_transcript
ENST00000377921 (RSU1-002) 16590611-16817383 protein_coding
ENST00000464074 (RSU1-004) 16593153-16817413 processed_transcript
ENST00000602389 (RSU1-201) 16590620-16817454 protein_coding
ENSG00000165983 (PTER)
phosphotriesterase related 		ENST00000298942 (PTER-201) 16484335-16513745 protein_coding
ENST00000378000 (PTER-002) 16436984-16513737 protein_coding
ENST00000423462 (PTER-202) 16436943-16513745 protein_coding
ENST00000485788 (PTER-003) 16484691-16486792 processed_transcript
ENST00000535784 (PTER-001) 16436943-16511256 protein_coding
ENSG00000165985 (C1QL3)
complement component 1, q subcomponent-like 3 		ENST00000298943 (C1QL3-001) 16513743-16522005 protein_coding
ENST00000619991 (C1QL3-201) 16514467-16521145 protein_coding
ENSG00000225213 (RP11-197M22.2)
 ENST00000421480 (RP11-197M22.2-001) 16721352-16748377 sense_intronic
ENSG00000275001 (uc_338)
TUC338 		ENST00000621872 (uc_338.1-209) 16767235-16767416 misc_RNA
CIL_00045Y_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049630-ENSMUSG00000026727 CGP 10090 2:13003457-13271431
GeneTranscriptPositionBiotype
ENSMUSG00000026727 (Rsu1)
Ras suppressor protein 1 		ENSMUST00000028059 (Rsu1-001) 13076967-13271431 protein_coding
ENSMUST00000114791 (Rsu1-006) 13076967-13271315 protein_coding
ENSMUST00000129257 (Rsu1-004) 13267461-13271310 retained_intron
ENSMUST00000131226 (Rsu1-003) 13218593-13271221 retained_intron
ENSMUST00000134551 (Rsu1-002) 13216772-13271270 nonsense_mediated_decay
ENSMUST00000137670 (Rsu1-005) 13219106-13271297 protein_coding
ENSMUST00000161912 (Rsu1-007) 13167473-13271308 nonsense_mediated_decay
ENSMUST00000162223 (Rsu1-008) 13216002-13271332 retained_intron
ENSMUSG00000049630 (C1ql3)
C1q-like 3 		ENSMUST00000061545 (C1ql3-001) 13003457-13011747 protein_coding
ENSMUSG00000099246 (Gm27540)
predicted gene, 27540 		ENSMUST00000184950 (Gm27540-201) 13226828-13227014 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00045Y_0001ENSDARG00000010350ENSDART00000016879ENSDARG00000045279ENSDART00000131094ENSDART00000136731CIL_00045Y_0002ENSG00000148484ENST00000345264ENST00000377911ENST00000377921ENST00000464074ENST00000602389ENSG00000165983ENST00000298942ENST00000378000ENST00000423462ENST00000485788ENST00000535784ENSG00000165985ENST00000298943ENST00000619991ENSG00000225213ENST00000421480ENSG00000275001ENST00000621872CIL_00045Y_0003ENSMUSG00000026727ENSMUST00000028059ENSMUST00000114791ENSMUST00000129257ENSMUST00000131226ENSMUST00000134551ENSMUST00000137670ENSMUST00000161912ENSMUST00000162223ENSMUSG00000049630ENSMUST00000061545ENSMUSG00000099246ENSMUST00000184950
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00045Y_0001ENSDARG00000010350ENSDART00000016879ENSDARG00000045279ENSDART00000131094CIL_00045Y_0002ENSG00000148484ENST00000345264ENST00000377911ENST00000377921ENST00000464074ENSG00000165983ENST00000298942ENST00000378000ENST00000423462ENST00000535784ENSG00000165985ENST00000298943ENSG00000225213ENST00000421480ENSG00000275001ENST00000621872CIL_00045Y_0003ENSMUSG00000026727ENSMUST00000028059ENSMUST00000114791ENSMUST00000137670ENSMUST00000161912ENSMUSG00000049630ENSMUST00000061545ENSMUSG00000099246ENSMUST00000184950
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010350 ENSDART00000016879 N/A N/A N/A 0.340±0.00 N/A N/A 0.046±0.00 N/A N/A N/A 0.841±0.00 N/A N/A N/A
ENSDARG00000045279 ENSDART00000131094 N/A N/A N/A 0.602±0.23 N/A N/A 30.715±10.16 8.680±3.90 N/A N/A 2.524±0.00 N/A N/A N/A
ENSDART00000136731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148484 ENST00000345264 12.820±0.00 11.132±0.00 1.796±0.00 3.113±0.32 7.733±3.10 7.604±3.33 2.917±1.04 5.658±3.80 4.613±2.53 5.536±0.57 3.343±0.00 7.369±4.59 9.057±3.23 4.410±3.79
ENST00000377911 36.698±0.00 36.597±0.00 5.581±0.00 9.467±2.32 23.281±4.78 27.096±11.94 10.559±2.76 16.855±7.82 14.819±7.23 22.342±1.03 7.457±0.82 27.814±10.72 29.066±4.58 14.816±6.47
ENST00000377921 2.566±0.00 3.245±0.00 N/A N/A N/A 3.328±0.00 2.239±0.00 N/A 1.269±0.00 3.864±0.00 N/A 1.286±0.00 6.012±0.00 2.378±0.00
ENST00000464074 N/A N/A N/A N/A N/A N/A N/A N/A 4.455±0.00 N/A 3.915±0.00 4.180±0.00 13.357±0.00 N/A
ENST00000602389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165983 ENST00000298942 N/A 1.191±0.00 N/A N/A N/A 0.673±0.30 0.523±0.00 N/A 0.413±0.00 N/A 1.601±0.00 0.353±0.00 0.360±0.12 N/A
ENST00000378000 0.820±0.00 N/A 5.472±0.00 N/A 1.930±0.35 0.565±0.00 0.708±0.42 0.986±0.00 1.344±0.63 1.251±0.00 N/A 0.921±0.42 0.929±0.16 0.315±0.00
ENST00000423462 1.294±0.00 1.462±0.00 N/A N/A 0.831±0.00 1.069±0.00 1.092±0.00 N/A 0.597±0.06 N/A 0.733±0.00 1.869±0.00 0.871±0.39 0.292±0.06
ENST00000485788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535784 2.170±0.00 N/A N/A N/A N/A 1.373±0.00 1.151±0.00 2.106±0.00 1.091±0.00 1.288±0.00 2.484±0.00 6.177±0.00 2.176±0.00 0.673±0.00
ENSG00000165985 ENST00000298943 N/A N/A N/A 16.529±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225213 ENST00000421480 0.213±0.00 0.215±0.00 N/A 0.183±0.00 0.105±0.03 0.036±0.00 N/A 0.096±0.00 N/A N/A 0.101±0.00 0.108±0.06 0.106±0.04 N/A
ENSG00000275001 ENST00000621872 N/A 0.187±0.00 N/A 0.637±0.54 N/A N/A N/A N/A 1.321±0.00 N/A N/A N/A N/A 0.713±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026727 ENSMUST00000028059 41.139±2.50 13.187±4.49 81.260±7.20 10.945±3.84 20.294±2.13 14.581±1.05 13.777±1.76 18.658±0.72 22.013±12.96 31.080±2.03 10.954±0.84 20.909±10.87 34.624±8.10 2.828±0.80
ENSMUST00000114791 N/A 2.963±0.00 N/A 1.207±0.00 N/A N/A N/A N/A N/A N/A 1.567±0.15 7.379±1.98 13.636±3.74 N/A
ENSMUST00000129257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137670 62.369±5.20 8.588±1.28 N/A N/A 22.030±5.53 16.248±2.15 12.295±0.29 N/A 4.876±0.00 30.992±1.97 N/A 61.784±17.85 N/A 2.921±0.00
ENSMUST00000161912 N/A N/A N/A 0.329±0.00 2.453±0.00 N/A N/A N/A N/A N/A N/A 2.761±0.51 N/A N/A
ENSMUST00000162223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049630 ENSMUST00000061545 0.064±0.04 0.048±0.02 0.304±0.00 11.309±12.79 0.595±0.22 0.180±0.04 0.028±0.01 0.577±0.40 0.097±0.04 0.106±0.05 0.219±0.06 0.088±0.04 0.050±0.05 0.022±0.01
ENSMUSG00000099246 ENSMUST00000184950 N/A N/A 1.021±0.56 1.040±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.598±0.39 4.564±0.00

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