C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysyl oxidase-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000061799 Loxl1-201 ENSMUSG00000032334 10090 - 9:58287723-58313212 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000061799
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000061799 52.267±5.35 25.223±3.43 30.713±0.43 2.360±1.62 76.794±23.74 28.435±6.32 20.584±2.40 14.164±2.04 1.080±0.44 86.557±3.77 2.626±0.23 43.564±21.74 4.466±4.87 7.007±3.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001669 IEA acrosomal vesicle
GO:0005507 IEA copper ion binding
GO:0005515 IPI protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005604 IEA basement membrane
GO:0005737 IEA cytoplasm
GO:0016641 IDA oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
GO:0031012 IDA extracellular matrix
GO:0032496 IEA response to lipopolysaccharide
GO:0035904 IEA aorta development
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261921 LOXL1-001 protein_coding Homo_sapiens 0 1273
ENST00000562548 LOXL1-005 retained_intron Homo_sapiens 0 479
ENST00000566011 LOXL1-002 nonsense_mediated_decay Homo_sapiens 0 1286
ENST00000566530 LOXL1-003 retained_intron Homo_sapiens 0 739
ENST00000567675 LOXL1-006 processed_transcript Homo_sapiens 0 241

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