C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAS, dexamethasone-induced 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062405 Rasd1-001 ENSMUSG00000049892 10090 - 11:59963181-59964944 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062405
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062405 30.429±8.54 13.369±1.91 2.052±0.60 5.327±0.00 27.470±8.08 12.705±1.30 2.867±0.77 3.977±0.50 0.425±0.50 2.138±0.49 0.673±0.41 34.645±6.56 8.864±4.80 4.204±0.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A0 CIL_0009A0_0002 VISTA 11:59693037-60296757
CIL_0000NV CIL_0000NV_0002 CGP 11:59948206-59964944
CIL_0000NN CIL_0000NN_0002 CGP 11:59963181-60046489

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005634 IEA nucleus
GO:0005886 IEA plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0007263 IEA nitric oxide mediated signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0048471 IEA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225688 RASD1-001 protein_coding Homo_sapiens 0 1092
ENST00000579152 RASD1-002 protein_coding Homo_sapiens 0 424

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