C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homeobox B13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062709 Hoxb13-001 ENSMUSG00000049604 10090 + 11:96194316-96197447 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderColonLiverLungOvaryPlacentaTestisENSMUST00000062709
Transcript ID Adipose Bladder Colon Liver Lung Ovary Placenta Testis
ENSMUST00000062709 0.027±0.00 0.711±0.09 212.292±17.21 0.035±0.03 0.438±0.42 0.076±0.00 0.023±0.01 0.021±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZM CIL_0007ZM_0002 VISTA 11:95992065-96592579

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0002009 IMP morphogenesis of an epithelium
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005667 IDA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0033574 IEA response to testosterone
GO:0040008 IMP regulation of growth
GO:0043565 IEA sequence-specific DNA binding
GO:0060527 IGI prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis
GO:0060743 IMP epithelial cell maturation involved in prostate gland development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290295 HOXB13-001 protein_coding Homo_sapiens 0 1243

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