C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homeobox B13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000290295 HOXB13-001 ENSG00000159184 9606 - 17:48724763-48729178 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000290295
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000290295 0.302±0.00 0.098±0.00 0.054±0.00 0.056±0.00 0.848±0.20 0.045±0.00 0.064±0.05 0.025±0.01 0.052±0.00 0.018±0.00 1.482±1.21 0.474±0.17 0.065±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZM CIL_0007ZM_0001 VISTA 17:48304888-48905406

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEP angiogenesis
GO:0002009 IEA morphogenesis of an epithelium
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005667 IEA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008544 TAS epidermis development
GO:0009611 TAS response to wounding
GO:0033574 IEA response to testosterone
GO:0040008 IEA regulation of growth
GO:0043565 IEA sequence-specific DNA binding
GO:0060527 IEA prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis
GO:0060743 IEA epithelial cell maturation involved in prostate gland development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062709 Hoxb13-001 protein_coding Mus_musculus 0 1243

Loading