C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 7B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062957 Ttc7b-201 ENSMUSG00000033530 10090 - 12:100300771-100520822 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062957
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062957 25.646±13.98 17.063±3.15 6.300±0.24 20.822±13.98 14.809±3.68 4.041±0.86 3.810±0.81 13.061±2.90 2.959±0.68 12.269±1.39 3.642±0.00 17.654±4.33 21.870±11.11 2.083±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005CA CIL_0005CA_0002 CGP 12:100199435-100520822
CIL_0005CD CIL_0005CD_0002 CGP 12:100300771-100725028

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328459 TTC7B-001 protein_coding Homo_sapiens 0 4039
ENST00000553948 TTC7B-004 protein_coding Homo_sapiens 0 665
ENST00000553972 TTC7B-015 protein_coding Homo_sapiens 0 1282
ENST00000554462 TTC7B-009 protein_coding Homo_sapiens 0 636
ENST00000554654 TTC7B-003 processed_transcript Homo_sapiens 0 1282
ENST00000555005 TTC7B-002 nonsense_mediated_decay Homo_sapiens 0 1555
ENST00000555239 TTC7B-008 nonsense_mediated_decay Homo_sapiens 0 556
ENST00000555894 TTC7B-012 protein_coding Homo_sapiens 0 479
ENST00000556490 TTC7B-010 processed_transcript Homo_sapiens 0 662
ENST00000556749 TTC7B-011 retained_intron Homo_sapiens 0 472
ENST00000556960 TTC7B-007 processed_transcript Homo_sapiens 0 248
ENST00000557059 TTC7B-006 retained_intron Homo_sapiens 0 370
ENST00000557292 TTC7B-013 protein_coding Homo_sapiens 0 747
ENST00000557766 TTC7B-005 protein_coding Homo_sapiens 0 641

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