C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated, serine-rich 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000063517 Spats2-201 ENSMUSG00000051934 10090 + 15:99126578-99213206 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063517
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063517 1.994±0.28 5.090±1.40 6.169±0.14 16.047±7.98 2.282±0.96 4.773±0.33 2.546±0.72 4.287±1.41 3.657±2.44 5.065±2.14 1.293±0.15 11.597±3.86 12.358±6.81 15.721±7.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GQ CIL_0007GQ_0002 CGP 15:99093170-99213206
CIL_00009M CIL_00009M_0002 CGP 15:99126578-99242817

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000321898 SPATS2-001 protein_coding Homo_sapiens 0 1714
ENST00000548710 SPATS2-021 protein_coding Homo_sapiens 0 279
ENST00000548777 SPATS2-010 protein_coding Homo_sapiens 8e-31 137
ENST00000549045 SPATS2-013 nonsense_mediated_decay Homo_sapiens 7e-33 145
ENST00000549298 SPATS2-018 protein_coding Homo_sapiens 2e-33 147
ENST00000549375 SPATS2-006 retained_intron Homo_sapiens 0 366
ENST00000549412 SPATS2-003 nonsense_mediated_decay Homo_sapiens 0 852
ENST00000549538 SPATS2-022 protein_coding Homo_sapiens 0 276
ENST00000550643 SPATS2-023 protein_coding Homo_sapiens 2e-32 143
ENST00000550997 SPATS2-012 protein_coding Homo_sapiens 0 396
ENST00000551540 SPATS2-016 protein_coding Homo_sapiens 0 315
ENST00000552918 SPATS2-005 protein_coding Homo_sapiens 0 1714
ENST00000553127 SPATS2-004 protein_coding Homo_sapiens 0 1714

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