C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00009M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123352-ENSG00000135519 CGP 9606 12:49366584-49558308
GeneTranscriptPositionBiotype
ENSG00000123352 (SPATS2)
spermatogenesis associated, serine-rich 2 		ENST00000321898 (SPATS2-001) 49367475-49527419 protein_coding
ENST00000547003 (SPATS2-020) 49522749-49526198 processed_transcript
ENST00000547865 (SPATS2-002) 49367547-49463625 protein_coding
ENST00000548377 (SPATS2-009) 49366962-49461037 protein_coding
ENST00000548388 (SPATS2-011) 49367547-49461229 retained_intron
ENST00000548654 (SPATS2-015) 49366905-49461037 protein_coding
ENST00000548710 (SPATS2-021) 49366909-49489561 protein_coding
ENST00000548727 (SPATS2-014) 49514442-49522853 retained_intron
ENST00000548777 (SPATS2-010) 49367518-49484663 protein_coding
ENST00000549045 (SPATS2-013) 49460879-49494944 nonsense_mediated_decay
ENST00000549179 (SPATS2-017) 49366929-49461028 protein_coding
ENST00000549298 (SPATS2-018) 49367384-49484673 protein_coding
ENST00000549375 (SPATS2-006) 49367462-49491159 retained_intron
ENST00000549412 (SPATS2-003) 49366905-49526365 nonsense_mediated_decay
ENST00000549538 (SPATS2-022) 49366856-49489559 protein_coding
ENST00000550643 (SPATS2-023) 49366905-49484668 protein_coding
ENST00000550997 (SPATS2-012) 49366584-49494771 protein_coding
ENST00000551540 (SPATS2-016) 49367496-49490691 protein_coding
ENST00000552171 (SPATS2-019) 49367547-49484595 protein_coding
ENST00000552557 (SPATS2-008) 49490115-49514613 processed_transcript
ENST00000552655 (SPATS2-007) 49490122-49496889 processed_transcript
ENST00000552918 (SPATS2-005) 49367510-49527226 protein_coding
ENST00000553127 (SPATS2-004) 49367465-49527424 protein_coding
ENSG00000135519 (KCNH3)
potassium voltage-gated channel, subfamily H (eag-related), member 3 		ENST00000257981 (KCNH3-001) 49539157-49558308 protein_coding
ENST00000548675 (KCNH3-004) 49556172-49557637 retained_intron
ENST00000550434 (KCNH3-002) 49541094-49543878 processed_transcript
ENST00000551415 (KCNH3-003) 49544254-49546240 processed_transcript
ENSG00000187778 (MCRS1)
microspherule protein 1 		ENST00000343810 (MCRS1-001) 49558320-49568153 protein_coding
ENST00000357123 (MCRS1-002) 49558643-49566439 protein_coding
ENST00000546244 (MCRS1-201) 49558295-49568145 protein_coding
ENST00000547182 (MCRS1-009) 49558573-49563075 processed_transcript
ENST00000548334 (MCRS1-014) 49563487-49567832 protein_coding
ENST00000548596 (MCRS1-013) 49564481-49567873 protein_coding
ENST00000548602 (MCRS1-003) 49558301-49568131 nonsense_mediated_decay
ENST00000548646 (MCRS1-008) 49558504-49559780 nonsense_mediated_decay
ENST00000549000 (MCRS1-005) 49559013-49568132 retained_intron
ENST00000549528 (MCRS1-015) 49564763-49567850 protein_coding
ENST00000550165 (MCRS1-006) 49558363-49568101 protein_coding
ENST00000551598 (MCRS1-007) 49556544-49560302 protein_coding
ENST00000551625 (MCRS1-004) 49558302-49567750 retained_intron
ENST00000552206 (MCRS1-011) 49565530-49568128 retained_intron
ENST00000552596 (MCRS1-010) 49558479-49559260 retained_intron
ENST00000553173 (MCRS1-012) 49559738-49568100 protein_coding
ENSG00000257464 (RP11-161H23.8)
 ENST00000549563 (RP11-161H23.8-001) 49442424-49442652 processed_pseudogene
ENSG00000257954 (RP11-161H23.10)
 ENST00000551907 (RP11-161H23.10-001) 49389516-49390162 processed_pseudogene
CIL_00009M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051934-ENSMUSG00000037579 CGP 10090 15:99126578-99242817
GeneTranscriptPositionBiotype
ENSMUSG00000037579 (Kcnh3)
potassium voltage-gated channel, subfamily H (eag-related), member 3 		ENSMUST00000041415 (Kcnh3-201) 99224976-99242817 protein_coding
ENSMUSG00000051934 (Spats2)
spermatogenesis associated, serine-rich 2 		ENSMUST00000063517 (Spats2-201) 99126578-99213206 protein_coding
ENSMUSG00000088377 (Gm25183)
predicted gene, 25183 		ENSMUST00000157752 (Gm25183-201) 99133067-99133172 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00009M_0001ENSG00000123352ENST00000321898ENST00000547003ENST00000549045ENST00000549298ENST00000549412ENST00000549538ENST00000550643ENST00000550997ENST00000552557ENST00000552918ENST00000553127ENSG00000135519ENST00000257981ENSG00000187778ENST00000343810ENST00000357123ENST00000546244ENST00000547182ENST00000548334ENST00000548602ENST00000549528ENST00000550165ENST00000551598ENST00000551625ENST00000552206ENST00000553173ENSG00000257464ENST00000549563ENSG00000257954ENST00000551907CIL_00009M_0002ENSMUSG00000037579ENSMUST00000041415ENSMUSG00000051934ENSMUST00000063517ENSMUSG00000088377ENSMUST00000157752
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123352 ENST00000321898 1.447±0.00 N/A N/A 1.030±0.63 1.634±0.00 2.562±0.00 0.685±0.00 1.313±0.00 0.704±0.00 0.784±0.00 0.314±0.00 3.495±0.85 2.273±0.53 6.440±0.75
ENST00000547003 N/A N/A N/A N/A N/A N/A 2.050±0.00 N/A 1.580±0.00 N/A N/A N/A N/A N/A
ENST00000547865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549045 N/A N/A 0.496±0.00 N/A N/A N/A N/A N/A N/A N/A 1.449±0.00 N/A N/A N/A
ENST00000549179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549298 N/A N/A N/A N/A N/A N/A 0.188±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000549375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549412 0.978±0.00 1.693±0.00 0.545±0.00 2.053±0.00 N/A N/A N/A N/A 0.426±0.00 1.246±0.00 N/A 3.292±2.45 2.156±0.00 8.670±4.54
ENST00000549538 N/A N/A 1.212±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550643 N/A N/A N/A 4.461±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550997 N/A N/A N/A N/A N/A N/A N/A N/A 1.433±0.00 N/A N/A N/A N/A N/A
ENST00000551540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552557 N/A N/A N/A N/A N/A 2.900±0.00 0.182±0.00 0.619±0.00 N/A 2.477±0.00 N/A N/A N/A N/A
ENST00000552655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552918 1.079±0.00 N/A N/A 2.020±0.40 0.894±0.00 2.309±0.60 0.195±0.03 2.198±0.00 0.682±0.00 1.747±1.25 0.283±0.05 2.374±1.11 1.674±1.15 11.925±7.07
ENST00000553127 N/A 0.845±0.00 N/A 0.875±0.00 1.039±0.13 N/A N/A N/A N/A N/A N/A N/A N/A 1.818±0.00
ENSG00000135519 ENST00000257981 N/A N/A 0.239±0.00 11.406±5.38 N/A N/A N/A N/A 0.121±0.00 1.557±0.00 N/A N/A N/A N/A
ENST00000548675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187778 ENST00000343810 3.464±0.00 4.647±0.00 0.657±0.00 5.049±2.84 3.995±3.34 5.481±0.00 12.807±12.18 9.976±0.00 10.122±0.00 3.143±2.35 2.947±2.15 22.331±5.14 22.751±6.20 22.521±2.85
ENST00000357123 5.458±0.00 7.108±0.00 N/A N/A 5.541±0.00 3.292±0.00 N/A N/A N/A N/A N/A 5.426±0.00 N/A 9.199±0.00
ENST00000546244 N/A N/A N/A 2.105±0.00 N/A N/A 0.384±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000547182 N/A N/A N/A N/A 1.816±0.00 N/A N/A N/A N/A N/A 6.483±0.00 10.259±7.49 N/A 17.093±0.00
ENST00000548334 N/A N/A N/A N/A N/A N/A N/A 1.001±0.00 N/A N/A N/A N/A N/A N/A
ENST00000548596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548602 3.059±0.00 10.052±0.00 N/A 6.926±0.00 5.237±0.00 1.486±0.35 8.924±0.00 6.629±0.00 N/A 5.009±0.00 2.430±1.31 6.237±1.86 6.639±0.51 13.941±0.00
ENST00000548646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549528 N/A N/A 1.499±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.360±0.00 5.867±0.00
ENST00000551598 N/A N/A N/A N/A N/A N/A N/A 5.576±0.00 0.909±0.00 N/A N/A N/A N/A N/A
ENST00000551625 N/A N/A 0.282±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.598±0.00 N/A N/A
ENST00000552206 N/A N/A N/A N/A N/A N/A N/A 0.842±0.00 N/A N/A N/A N/A N/A N/A
ENST00000552596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.836±0.00 N/A 14.247±0.00
ENSG00000257464 ENST00000549563 N/A N/A N/A 0.058±0.00 0.059±0.00 0.439±0.00 0.622±0.00 N/A 0.054±0.00 N/A N/A 1.715±2.08 N/A N/A
ENSG00000257954 ENST00000551907 0.018±0.00 0.481±0.00 1.069±0.00 0.407±0.00 1.371±0.00 1.735±0.00 N/A 0.538±0.00 N/A 0.294±0.22 0.031±0.01 0.378±0.20 0.039±0.00 0.310±0.18
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037579 ENSMUST00000041415 1.401±1.06 0.539±0.20 0.065±0.00 20.959±18.88 0.402±0.21 12.003±1.29 0.109±0.05 0.146±0.03 0.051±0.05 1.422±0.22 0.035±0.00 3.961±1.70 0.065±0.04 0.295±0.13
ENSMUSG00000051934 ENSMUST00000063517 1.994±0.28 5.090±1.40 6.169±0.14 16.047±7.98 2.282±0.96 4.773±0.33 2.546±0.72 4.287±1.41 3.657±2.44 5.065±2.14 1.293±0.15 11.597±3.86 12.358±6.81 15.721±7.18
ENSMUSG00000088377 ENSMUST00000157752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.191±0.00 N/A

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