C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 438
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000063989 Zfp438-201 ENSMUSG00000050945 10090 - 18:5210031-5334439 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063989
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063989 1.119±0.32 0.985±0.17 1.392±0.07 0.804±0.33 1.510±0.46 0.701±0.10 1.307±0.15 1.046±0.15 0.426±0.12 1.620±0.31 0.971±0.16 1.589±0.47 0.656±0.33 2.970±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R6 CIL_0000R6_0002 CGP 18:5210031-5775467

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 ISS sequence-specific DNA binding transcription factor activity
GO:0005634 ISS nucleus
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331737 ZNF438-001 protein_coding Homo_sapiens 0 802
ENST00000361310 ZNF438-003 protein_coding Homo_sapiens 0 802
ENST00000375311 ZNF438-002 protein_coding Homo_sapiens 0 747
ENST00000413025 ZNF438-201 protein_coding Homo_sapiens 0 802
ENST00000436087 ZNF438-202 protein_coding Homo_sapiens 0 802
ENST00000442986 ZNF438-203 protein_coding Homo_sapiens 0 802
ENST00000452305 ZNF438-204 protein_coding Homo_sapiens 0 802
ENST00000538351 ZNF438-005 protein_coding Homo_sapiens 0 802
ENST00000609683 ZNF438-004 nonsense_mediated_decay Homo_sapiens 0 200

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