C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064167 Rnf11-002 ENSMUSG00000028557 10090 - 4:109452899-109476983 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000064167
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000064167 17.316±1.84 19.570±0.20 16.717±1.03 18.726±10.56 14.084±5.53 7.918±0.00 11.879±3.85 23.782±10.91 20.131±7.46 12.642±6.33 5.897±0.29

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IPI ubiquitin ligase complex
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005768 IEA endosome
GO:0006511 IPI ubiquitin-dependent protein catabolic process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242719 RNF11-001 protein_coding Homo_sapiens 0 2222
ENST00000392337 AC019178.2-001 processed_pseudogene Homo_sapiens 0 407
ENST00000427702 RNF11B-001 processed_pseudogene Homo_sapiens 0 444
ENST00000486691 RNF11-003 processed_transcript Homo_sapiens 0 876
ENST00000494873 RNF11-002 processed_transcript Homo_sapiens 0 645

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