C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064460 St6galnac3-201 ENSMUSG00000052544 10090 - 3:153205405-153725062 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENSMUST00000064460
Transcript ID Adrenal Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000064460 1.680±0.75 3.034±0.60 2.675±1.47 1.094±0.45 0.882±0.00 0.970±0.85 0.479±0.24 3.567±1.36 2.609±0.56 0.358±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002A5 CIL_0002A5_0002 CGP 3:152817081-153725062

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0006677 IEA glycosylceramide metabolic process
GO:0006687 IEA glycosphingolipid metabolic process
GO:0009100 IEA glycoprotein metabolic process
GO:0016021 IEA integral component of membrane
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328299 ST6GALNAC3-001 protein_coding Homo_sapiens 0 859
ENST00000464140 ST6GALNAC3-002 processed_transcript Homo_sapiens 0 460
ENST00000621530 ST6GALNAC3-201 protein_coding Homo_sapiens 0 514

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