C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1110051M20 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064652 1110051M20Rik-002 ENSMUSG00000040591 10090 - 2:91275068-91444622 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064652
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064652 18.031±3.55 23.550±12.00 8.627±3.08 10.726±1.70 14.952±3.44 13.443±8.18 10.966±2.44 16.507±2.59 19.328±8.93 18.745±0.87 26.142±8.54 21.601±8.78 10.129±3.23 12.156±4.19

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278460 C11orf49-002 protein_coding Homo_sapiens 0 998
ENST00000378615 C11orf49-007 protein_coding Homo_sapiens 0 996
ENST00000378618 C11orf49-003 protein_coding Homo_sapiens 0 1234
ENST00000395449 ARFGAP2-006 processed_transcript Homo_sapiens 4.06377e-44 183
ENST00000395460 C11orf49-006 protein_coding Homo_sapiens 0 996
ENST00000426335 ARFGAP2-201 protein_coding Homo_sapiens 0 230
ENST00000522712 C11orf49-016 retained_intron Homo_sapiens 0 368
ENST00000524782 ARFGAP2-001 protein_coding Homo_sapiens 0 230
ENST00000525279 C11orf49-012 nonsense_mediated_decay Homo_sapiens 0 311
ENST00000525895 C11orf49-004 nonsense_mediated_decay Homo_sapiens 0 769
ENST00000526424 C11orf49-009 nonsense_mediated_decay Homo_sapiens 0 279
ENST00000526827 C11orf49-021 protein_coding Homo_sapiens 0 604
ENST00000527234 C11orf49-018 processed_transcript Homo_sapiens 0 348
ENST00000527268 C11orf49-015 processed_transcript Homo_sapiens 0 676
ENST00000527667 C11orf49-011 nonsense_mediated_decay Homo_sapiens 0 268
ENST00000527776 ARFGAP2-027 protein_coding Homo_sapiens 5.04467e-44 182
ENST00000527784 C11orf49-005 nonsense_mediated_decay Homo_sapiens 0 231
ENST00000528488 C11orf49-001 nonsense_mediated_decay Homo_sapiens 0 368
ENST00000531648 C11orf49-014 retained_intron Homo_sapiens 0 230
ENST00000532633 C11orf49-013 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000532840 C11orf49-023 retained_intron Homo_sapiens 0 448
ENST00000533124 C11orf49-010 processed_transcript Homo_sapiens 3e-31 139
ENST00000533243 ARFGAP2-007 nonsense_mediated_decay Homo_sapiens 2.94273e-44 183
ENST00000534249 C11orf49-017 nonsense_mediated_decay Homo_sapiens 0 610

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