C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1110051M20 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040591 1110051M20Rik 10090 - 2:91275068-91444704 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000064652 1110051M20Rik-002 91275068-91444622 protein_coding
  ENSMUST00000094835 1110051M20Rik-003 91278244-91444680 protein_coding
  ENSMUST00000102594 1110051M20Rik-001 91277830-91444642 protein_coding
  ENSMUST00000132092 1110051M20Rik-008 91281742-91283141 processed_transcript
  ENSMUST00000139490 1110051M20Rik-006 91418784-91444637 processed_transcript
  ENSMUST00000139807 1110051M20Rik-004 91383784-91444669 processed_transcript
  ENSMUST00000141262 1110051M20Rik-005 91418833-91444704 processed_transcript
  ENSMUST00000145573 1110051M20Rik-007 91304411-91444643 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064652ENSMUST00000094835ENSMUST00000102594
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064652 18.031±3.55 23.550±12.00 8.627±3.08 10.726±1.70 14.952±3.44 13.443±8.18 10.966±2.44 16.507±2.59 19.328±8.93 18.745±0.87 26.142±8.54 21.601±8.78 10.129±3.23 12.156±4.19
ENSMUST00000094835 N/A 14.294±0.00 N/A 15.442±4.36 N/A N/A N/A 9.365±1.60 N/A N/A N/A N/A N/A 9.508±0.27
ENSMUST00000102594 8.226±0.18 N/A N/A 12.220±0.99 N/A N/A 3.186±0.00 8.472±0.00 N/A 9.560±0.00 N/A 11.452±1.24 N/A 12.922±2.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090616 C25H11orf49 chromosome 11 open reading frame 49 protein_coding Danio_rerio
ENSG00000149179 C11orf49 chromosome 11 open reading frame 49 protein_coding Homo_sapiens

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