C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Myb/SANT-like DNA-binding domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064807 Msantd3-002 ENSMUSG00000039693 10090 + 4:48540079-48561577 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENSMUST00000064807
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064807 0.958±0.18 0.353±0.00 3.343±0.36 5.177±1.65 0.625±0.02 0.236±0.06 0.531±0.34 0.423±0.00 1.313±0.00 1.205±1.00 1.142±0.21 0.589±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000206 CIL_000206_0002 CGP 4:48430858-48561919
CIL_000205 CIL_000205_0002 CGP 4:48539935-48663131

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374885 MSANTD3-003 protein_coding Homo_sapiens 0 477
ENST00000374886 MSANTD3-004 protein_coding Homo_sapiens 0 601
ENST00000395067 MSANTD3-001 protein_coding Homo_sapiens 0 1162
ENST00000398977 MSANTD3-005 protein_coding Homo_sapiens 0 481
ENST00000489377 MSANTD3-002 processed_transcript Homo_sapiens 0 691
ENST00000583159 RP11-720N19.1-001 processed_pseudogene Homo_sapiens 0 614
ENST00000613183 MSANTD3-201 protein_coding Homo_sapiens 0 1201
ENST00000622639 MSANTD3-202 protein_coding Homo_sapiens 0 1195

Loading