C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LON peptidase N-terminal domain and ring finger 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000065297 Lonrf1-201 ENSMUSG00000039633 10090 - 8:36216064-36249516 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065297
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065297 1.714±0.96 2.957±0.71 7.468±2.45 6.647±2.21 0.873±0.48 0.607±0.12 0.357±0.15 2.379±0.51 1.235±0.87 1.380±0.35 3.763±0.82 5.351±1.71 4.397±2.69 1.410±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VH CIL_0003VH_0002 CGP 8:36216064-36514320

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004176 IEA ATP-dependent peptidase activity
GO:0005575 ND cellular_component
GO:0006200 IEA ATP catabolic process
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000398246 LONRF1-001 protein_coding Homo_sapiens 0 2379
ENST00000524526 LONRF1-004 protein_coding Homo_sapiens 0 1171
ENST00000525024 LONRF1-008 protein_coding Homo_sapiens 0 767
ENST00000526610 LONRF1-007 retained_intron Homo_sapiens 0 525
ENST00000526680 LONRF1-002 nonsense_mediated_decay Homo_sapiens 0 1339
ENST00000527055 LONRF1-009 retained_intron Homo_sapiens 0 348
ENST00000533751 LONRF1-003 protein_coding Homo_sapiens 0 1585

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