C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centromere protein J
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000065302 Cenpj-001 ENSMUSG00000064128 10090 - 14:56526761-56571846 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065302
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065302 0.221±0.13 0.338±0.09 0.683±0.13 2.052±0.37 0.389±0.17 0.323±0.15 0.322±0.14 0.362±0.09 1.122±1.11 0.514±0.00 0.315±0.08 0.741±0.21 2.886±1.73 0.945±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000G6 CIL_0000G6_0003 CGP 14:56402697-56571846

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005813 IEA centrosome
GO:0005814 ISS centriole
GO:0005874 IEA microtubule
GO:0007099 IEA centriole replication
GO:0015631 IEA tubulin binding
GO:0019901 IEA protein kinase binding
GO:0019904 IEA protein domain specific binding
GO:0046599 ISS regulation of centriole replication
GO:0046785 IEA microtubule polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000381884 CENPJ-001 protein_coding Homo_sapiens 0 2739
ENST00000418179 CENPJ-002 protein_coding Homo_sapiens 0 516
ENST00000471870 CENPJ-004 processed_transcript Homo_sapiens 0 289
ENST00000545981 CENPJ-201 protein_coding Homo_sapiens 0 1997
ENST00000616936 CENPJ-202 protein_coding Homo_sapiens 0 1989

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