C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibronectin type 3 and ankyrin repeat domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000065359 Fank1-001 ENSMUSG00000053111 10090 + 7:133776861-133881532 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065359
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065359 0.103±0.02 0.140±0.05 0.108±0.05 1.966±0.47 0.065±0.04 0.188±0.05 0.058±0.02 0.041±0.02 0.029±0.02 1.155±0.76 0.028±0.01 1.441±0.92 0.601±0.19 118.610±19.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001V9 CIL_0001V9_0002 CGP 7:133709333-133782726
CIL_0001V8 CIL_0001V8_0002 CGP 7:133720942-133881532
CIL_0003VS CIL_0003VS_0002 CGP 7:133776861-134232146

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368691 FANK1-004 protein_coding Homo_sapiens 0 324
ENST00000368693 FANK1-201 protein_coding Homo_sapiens 0 1127
ENST00000368695 FANK1-001 protein_coding Homo_sapiens 0 1127
ENST00000456942 FANK1-009 protein_coding Homo_sapiens 0 566
ENST00000464130 FANK1-007 processed_transcript Homo_sapiens 0 422
ENST00000477963 FANK1-002 processed_transcript Homo_sapiens 0 418
ENST00000492670 FANK1-008 processed_transcript Homo_sapiens 0 867

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