C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calpastatin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000065629 Cast-201 ENSMUSG00000021585 10090 - 13:74694286-74807921 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000065629
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000065629 1.991±0.27 1.456±0.07 12.573±1.90 1.844±1.51 1.902±1.01 3.020±1.89 3.429±0.08 1.003±0.16 3.283±2.51 9.269±1.03 5.684±5.40 26.132±10.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000JE CIL_0000JE_0002 CGP 13:74694286-75132498

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0010466 IGI negative regulation of peptidase activity
GO:0016020 IDA membrane
GO:0030163 ISA protein catabolic process
GO:0044822 IEA poly(A) RNA binding
GO:2000675 IEA negative regulation of type B pancreatic cell apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309190 CAST-003 protein_coding Homo_sapiens 0 1574
ENST00000325674 CAST-201 protein_coding Homo_sapiens 0 1133
ENST00000338252 CAST-005 protein_coding Homo_sapiens 0 1280
ENST00000341926 CAST-004 protein_coding Homo_sapiens 0 1354
ENST00000348386 CAST-002 processed_transcript Homo_sapiens 0 1123
ENST00000395812 CAST-011 protein_coding Homo_sapiens 0 1495
ENST00000395813 CAST-202 protein_coding Homo_sapiens 0 1522
ENST00000437034 CAST-041 protein_coding Homo_sapiens 0 924
ENST00000484552 CAST-001 nonsense_mediated_decay Homo_sapiens 0 1022
ENST00000503828 CAST-038 protein_coding Homo_sapiens 0 204
ENST00000504465 CAST-020 protein_coding Homo_sapiens 0 1327
ENST00000508579 CAST-037 protein_coding Homo_sapiens 0 1024
ENST00000508608 CAST-012 protein_coding Homo_sapiens 0 1502
ENST00000508830 CAST-008 protein_coding Homo_sapiens 0 1238
ENST00000509259 CAST-039 protein_coding Homo_sapiens 1e-29 134
ENST00000509529 CAST-021 retained_intron Homo_sapiens 0 270
ENST00000509903 CAST-017 protein_coding Homo_sapiens 0 996
ENST00000510098 CAST-022 nonsense_mediated_decay Homo_sapiens 0 580
ENST00000510156 CAST-016 protein_coding Homo_sapiens 0 1157
ENST00000510500 CAST-014 protein_coding Homo_sapiens 0 1210
ENST00000510756 CAST-010 protein_coding Homo_sapiens 0 1391
ENST00000511049 CAST-013 protein_coding Homo_sapiens 0 1507
ENST00000511782 CAST-018 protein_coding Homo_sapiens 0 1319
ENST00000512191 CAST-040 retained_intron Homo_sapiens 0 213
ENST00000513666 CAST-019 retained_intron Homo_sapiens 0 688
ENST00000515663 CAST-015 protein_coding Homo_sapiens 0 931

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