C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000JE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000058693-ENSDARG00000002600 CGP 7955 21:9989897-10146352
GeneTranscriptPositionBiotype
ENSDARG00000002600 (pcsk1)
proprotein convertase subtilisin/kexin type 1 		ENSDART00000014668 (pcsk1-201) 10109018-10146283 protein_coding
ENSDART00000147473 (pcsk1-001) 10108839-10146352 protein_coding
ENSDARG00000058693 (cast)
calpastatin 		ENSDART00000081614 (cast-201) 9991040-10078471 protein_coding
ENSDART00000131448 (cast-010) 10036156-10070937 protein_coding
ENSDART00000132699 (cast-001) 9989897-10078503 protein_coding
ENSDART00000133171 (cast-016) 9990613-9999635 protein_coding
ENSDART00000133443 (cast-007) 10031776-10070960 protein_coding
ENSDART00000135858 (cast-014) 10048306-10056515 retained_intron
ENSDART00000135937 (cast-009) 10028145-10070935 protein_coding
ENSDART00000136308 (cast-013) 10031772-10056537 protein_coding
ENSDART00000138619 (cast-011) 10029683-10056501 protein_coding
ENSDART00000138989 (cast-015) 9999591-10000620 retained_intron
ENSDART00000139289 (cast-004) 10036138-10079028 protein_coding
ENSDART00000139814 (cast-006) 10028144-10079021 protein_coding
ENSDART00000141297 (cast-003) 10029722-10081052 protein_coding
ENSDART00000144370 (cast-005) 10033258-10079019 protein_coding
ENSDART00000144770 (cast-012) 10031761-10056556 protein_coding
ENSDART00000148097 (cast-008) 10029620-10070944 protein_coding
CIL_0000JE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021585-ENSMUSG00000021587 CGP 10090 13:74694286-75132498
GeneTranscriptPositionBiotype
ENSMUSG00000021585 (Cast)
calpastatin 		ENSMUST00000065629 (Cast-201) 74694286-74807921 protein_coding
ENSMUSG00000021587 (Pcsk1)
proprotein convertase subtilisin/kexin type 1 		ENSMUST00000022075 (Pcsk1-001) 75089826-75132498 protein_coding
ENSMUST00000135349 (Pcsk1-002) 75089916-75106603 retained_intron
ENSMUSG00000086743 (Hnrnpa1l2-ps)
heterogeneous nuclear ribonucleoprotein A1-like 2, pseudogene 		ENSMUST00000129154 (Hnrnpa1l2-ps-001) 74864305-74865356 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JE_0001ENSDARG00000002600ENSDART00000014668ENSDART00000147473ENSDARG00000058693ENSDART00000081614ENSDART00000131448ENSDART00000132699ENSDART00000133171ENSDART00000133443ENSDART00000135858ENSDART00000135937ENSDART00000136308ENSDART00000138619ENSDART00000138989ENSDART00000139289ENSDART00000139814ENSDART00000141297ENSDART00000144370ENSDART00000144770ENSDART00000148097CIL_0000JE_0002ENSMUSG00000021585ENSMUST00000065629ENSMUSG00000021587ENSMUST00000022075ENSMUST00000135349ENSMUSG00000086743ENSMUST00000129154
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JE_0001ENSDARG00000002600ENSDART00000014668ENSDART00000147473ENSDARG00000058693ENSDART00000081614ENSDART00000132699ENSDART00000133171CIL_0000JE_0002ENSMUSG00000021585ENSMUST00000065629ENSMUSG00000021587ENSMUST00000022075ENSMUST00000135349ENSMUSG00000086743ENSMUST00000129154
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002600 ENSDART00000014668 N/A N/A N/A 17.122±0.00 N/A N/A 0.047±0.00 0.187±0.00 N/A N/A 0.836±0.00 N/A N/A N/A
ENSDART00000147473 N/A N/A N/A 2.843±3.07 N/A N/A N/A 0.097±0.00 0.027±0.00 N/A 1.154±0.00 N/A N/A N/A
ENSDARG00000058693 ENSDART00000081614 N/A N/A N/A 2.606±0.00 N/A N/A 24.243±0.00 10.556±0.00 0.532±0.00 N/A N/A N/A N/A N/A
ENSDART00000131448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000132699 N/A N/A N/A 1.074±0.00 N/A N/A 48.073±0.00 4.578±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000133171 N/A N/A N/A N/A N/A N/A 92.624±0.00 6.929±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000133443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000136308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000138619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000138989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021585 ENSMUST00000065629 1.991±0.27 1.456±0.07 12.573±1.90 1.844±1.51 1.902±1.01 3.020±1.89 3.429±0.08 1.003±0.16 3.283±2.51 N/A 9.269±1.03 5.684±5.40 26.132±10.52 N/A
ENSMUSG00000021587 ENSMUST00000022075 0.075±0.05 3.912±0.33 0.042±0.00 4.024±3.70 0.059±0.04 3.497±0.40 0.031±0.01 0.015±0.00 0.003±0.00 0.237±0.14 0.050±0.03 0.090±0.03 0.014±0.01 0.094±0.04
ENSMUST00000135349 N/A N/A N/A N/A 0.158±0.05 N/A 0.038±0.01 0.102±0.09 N/A N/A N/A N/A N/A N/A
ENSMUSG00000086743 ENSMUST00000129154 0.070±0.00 N/A 0.281±0.13 0.054±0.01 0.078±0.00 0.151±0.00 0.062±0.02 0.116±0.03 0.157±0.08 0.153±0.08 0.054±0.02 0.221±0.14 0.212±0.03 0.098±0.02

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