C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 179, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000066296 Fam179b-201 ENSMUSG00000035614 10090 + 12:64965742-65022573 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066296
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066296 2.192±0.72 8.936±0.47 3.677±0.70 4.362±1.30 3.228±2.07 0.997±0.50 1.223±0.16 2.245±0.94 1.486±0.66 3.720±1.59 1.172±0.26 4.329±2.48 3.793±1.14 4.145±1.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005HJ CIL_0005HJ_0003 CGP 12:64942440-65022573
CIL_00046Q CIL_00046Q_0002 CGP 12:64965742-65063386

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361462 FAM179B-002 protein_coding Homo_sapiens 0 6394
ENST00000361577 FAM179B-001 protein_coding Homo_sapiens 0 4263
ENST00000553817 KLHL28-006 processed_transcript Homo_sapiens 0 305
ENST00000555607 FAM179B-004 retained_intron Homo_sapiens 0 3075
ENST00000555874 FAM179B-007 protein_coding Homo_sapiens 0 494
ENST00000555945 FAM179B-005 retained_intron Homo_sapiens 0 2386
ENST00000556823 FAM179B-010 protein_coding Homo_sapiens 0 433
ENST00000557423 FAM179B-003 nonsense_mediated_decay Homo_sapiens 0 3077

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