C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 2310022A10 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067386 2310022A10Rik-001 ENSMUSG00000049643 10090 + 7:27553233-27582099 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067386
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067386 7.504±2.32 8.708±3.33 6.516±0.46 8.311±4.90 9.644±2.61 6.394±3.07 11.630±0.68 5.056±1.64 5.614±4.13 10.646±0.21 4.321±0.28 8.083±5.23 7.877±3.71 6.689±3.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357884 C19orf47-003 nonsense_mediated_decay Homo_sapiens 0 987
ENST00000392035 C19orf47-002 protein_coding Homo_sapiens 0 1299
ENST00000473515 SCML4-001 retained_intron Homo_sapiens 0.00005 55
ENST00000577617 C19orf47-008 protein_coding Homo_sapiens 0 532
ENST00000580606 C19orf47-005 protein_coding Homo_sapiens 0 544
ENST00000580977 C19orf47-007 nonsense_mediated_decay Homo_sapiens 0 326
ENST00000582006 C19orf47-006 protein_coding Homo_sapiens 0 547
ENST00000582734 C19orf47-004 retained_intron Homo_sapiens 0 658
ENST00000582783 C19orf47-001 protein_coding Homo_sapiens 0 1367
ENST00000584868 C19orf47-009 processed_transcript Homo_sapiens 0 322

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