C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: epilepsy, progressive myoclonic epilepsy, type 2 gene alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000069106 Epm2a-001 ENSMUSG00000055493 10090 + 10:11343404-11459644 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000069106
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000069106 4.616±0.64 4.724±0.66 3.147±0.05 2.426±0.87 4.194±1.67 0.762±0.18 7.387±0.30 4.054±0.26 1.120±0.86 3.975±0.33 28.744±1.69 3.370±1.13 0.706±0.41 0.861±0.53

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004439 IBA phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity
GO:0004725 IDA protein tyrosine phosphatase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 ISS cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005829 ISA cytosol
GO:0005844 IEA polysome
GO:0005977 IEA glycogen metabolic process
GO:0006914 IEA autophagy
GO:0007399 IMP nervous system development
GO:0008138 IBA protein tyrosine/serine/threonine phosphatase activity
GO:0019203 IEA carbohydrate phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0046855 IBA inositol phosphate dephosphorylation
GO:0046959 IMP habituation
GO:2001070 IEA starch binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367519 EPM2A-002 protein_coding Homo_sapiens 0 1129
ENST00000435470 EPM2A-004 protein_coding Homo_sapiens 0 863
ENST00000450221 EPM2A-001 protein_coding Homo_sapiens 0 569
ENST00000489412 EPM2A-006 processed_transcript Homo_sapiens 0 307
ENST00000496228 EPM2A-005 processed_transcript Homo_sapiens 0 307
ENST00000611340 EPM2A-201 protein_coding Homo_sapiens 0 832
ENST00000618445 EPM2A-202 protein_coding Homo_sapiens 0 1096

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