C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435470 EPM2A-004 ENSG00000112425 9606 - 6:145625371-145735257 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000435470
Transcript ID Bladder
ENST00000435470 0.604±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030K CIL_00030K_0002 CGP 6:144285701-145736024

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006470 IEA protein dephosphorylation
GO:0008138 IEA protein tyrosine/serine/threonine phosphatase activity
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069106 Epm2a-001 protein_coding Mus_musculus 0 863
ENSMUST00000161438 Epm2a-002 processed_transcript Mus_musculus 5e-16 90

Loading