C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 580
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000069324 Zfp580-201 ENSMUSG00000055633 10090 + 7:5051532-5053722 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000069324
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000069324 6.878±2.03 9.086±2.03 8.612±1.37 16.299±9.15 5.204±2.92 3.892±0.55 3.019±1.34 4.653±0.76 0.975±0.49 9.831±1.16 2.653±0.36 13.705±5.08 0.974±0.65 2.948±1.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SV CIL_0003SV_0002 CGP 7:5034439-5053722

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001938 ISS positive regulation of endothelial cell proliferation
GO:0002690 ISS positive regulation of leukocyte chemotaxis
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006935 IEA chemotaxis
GO:0006954 IEA inflammatory response
GO:0010595 ISS positive regulation of endothelial cell migration
GO:0010628 ISS positive regulation of gene expression
GO:0032757 ISS positive regulation of interleukin-8 production
GO:0046872 IEA metal ion binding
GO:0070301 ISS cellular response to hydrogen peroxide

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325333 ZNF580-001 protein_coding Homo_sapiens 0 1011
ENST00000543039 ZNF580-002 protein_coding Homo_sapiens 0 833
ENST00000545125 ZNF580-201 protein_coding Homo_sapiens 0 833
ENST00000590190 ZNF580-005 protein_coding Homo_sapiens 4e-32 141
ENST00000592461 ZNF580-003 protein_coding Homo_sapiens 0 475
ENST00000592881 ZNF580-004 protein_coding Homo_sapiens 0 470
ENST00000592996 CCDC106-009 protein_coding Homo_sapiens 6e-29 132

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