C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: complement component 4B (Chido blood group)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000069507 C4b-001 ENSMUSG00000073418 10090 - 17:34728380-34743882 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000069507
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000069507 79.950±39.49 16.485±3.16 21.444±0.57 3.035±4.27 62.257±14.44 9.609±1.84 6.654±2.35 1.742±0.77 147.780±127.09 57.191±5.93 1.365±0.77 13.397±3.73 4.422±5.67 0.733±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000424 CIL_000424_0002 CGP 17:34728380-34804561

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004866 IEA endopeptidase inhibitor activity
GO:0005615 IEA extracellular space
GO:0006954 IEA inflammatory response
GO:0006958 IEA complement activation, classical pathway
GO:0010951 IEA negative regulation of endopeptidase activity
GO:0045087 IEA innate immune response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375177 C4B-001 protein_coding Homo_sapiens 0 3666
ENST00000375295 C4A-001 protein_coding Homo_sapiens 0 3661
ENST00000383325 C4A-001 protein_coding Homo_sapiens 0 3666
ENST00000411583 C4B-001 protein_coding Homo_sapiens 0 3666
ENST00000421274 C4A-001 protein_coding Homo_sapiens 0 3661
ENST00000425700 C4B-201 protein_coding Homo_sapiens 0 2904
ENST00000428956 C4A-001 protein_coding Homo_sapiens 0 3666
ENST00000435363 C4B-001 protein_coding Homo_sapiens 0 3666
ENST00000435500 C4B_2-001 protein_coding Homo_sapiens 0 3666
ENST00000449788 C4B-001 protein_coding Homo_sapiens 0 3683
ENST00000460060 C4A-008 retained_intron Homo_sapiens 0 484
ENST00000460841 C4A-005 retained_intron Homo_sapiens 0 427
ENST00000461632 C4B-005 retained_intron Homo_sapiens 0 427
ENST00000462533 C4A-008 retained_intron Homo_sapiens 0 484
ENST00000463034 C4A-011 retained_intron Homo_sapiens 0 551
ENST00000463249 C4B-010 retained_intron Homo_sapiens 0 656
ENST00000464474 C4B-010 retained_intron Homo_sapiens 0 678
ENST00000464996 C4B-009 retained_intron Homo_sapiens 0.000000000008 75
ENST00000465720 C4B_2-008 retained_intron Homo_sapiens 0 484
ENST00000466356 C4B-005 retained_intron Homo_sapiens 0 427
ENST00000466864 C4B_2-010 retained_intron Homo_sapiens 0 678
ENST00000467619 C4A-005 retained_intron Homo_sapiens 0 427
ENST00000468936 C4B-011 retained_intron Homo_sapiens 0 551
ENST00000470365 C4A-017 retained_intron Homo_sapiens 0 518
ENST00000470477 C4A-011 retained_intron Homo_sapiens 0 551
ENST00000471317 C4A-005 retained_intron Homo_sapiens 0 427
ENST00000471624 C4A-009 retained_intron Homo_sapiens 0.000000000008 75
ENST00000472275 C4B-005 retained_intron Homo_sapiens 0 427
ENST00000473162 C4B-008 retained_intron Homo_sapiens 0 484
ENST00000473927 C4B-011 retained_intron Homo_sapiens 0 551
ENST00000474672 C4B-008 retained_intron Homo_sapiens 0 484
ENST00000475110 C4B_2-007 processed_transcript Homo_sapiens 0 374
ENST00000475612 C4A-010 retained_intron Homo_sapiens 0 684
ENST00000477131 C4A-011 retained_intron Homo_sapiens 0 551
ENST00000478025 C4A-009 retained_intron Homo_sapiens 0.000000000008 75
ENST00000478388 C4B-009 retained_intron Homo_sapiens 0.000000000008 75
ENST00000480097 C4B-011 retained_intron Homo_sapiens 0 551
ENST00000480401 C4A-011 retained_intron Homo_sapiens 0 551
ENST00000480795 C4A-015 retained_intron Homo_sapiens 0 335
ENST00000483198 C4B-010 retained_intron Homo_sapiens 0 684
ENST00000483562 C4A-007 processed_transcript Homo_sapiens 0 374
ENST00000484565 C4A-010 retained_intron Homo_sapiens 0 684
ENST00000485263 C4B-008 retained_intron Homo_sapiens 0 484
ENST00000485492 C4B_2-011 retained_intron Homo_sapiens 0 551
ENST00000485815 C4B-009 retained_intron Homo_sapiens 0.000000000008 75
ENST00000486992 C4B-017 retained_intron Homo_sapiens 0 518
ENST00000487105 C4B_2-009 retained_intron Homo_sapiens 0.000000000008 75
ENST00000487226 C4B-007 processed_transcript Homo_sapiens 0 374
ENST00000487248 C4B_2-005 retained_intron Homo_sapiens 0 427
ENST00000487749 C4B-005 retained_intron Homo_sapiens 0 427
ENST00000488091 C4A-008 retained_intron Homo_sapiens 0 484
ENST00000488693 C4A-007 processed_transcript Homo_sapiens 0 374
ENST00000488817 C4B-007 processed_transcript Homo_sapiens 0 374
ENST00000489963 C4A-007 processed_transcript Homo_sapiens 0 374
ENST00000490545 C4A-009 retained_intron Homo_sapiens 0.000000000008 75
ENST00000491185 C4A-005 retained_intron Homo_sapiens 0 427
ENST00000491876 C4A-010 retained_intron Homo_sapiens 0 656
ENST00000492166 C4A-008 retained_intron Homo_sapiens 0 484
ENST00000492958 C4A-009 retained_intron Homo_sapiens 0.000000000008 75
ENST00000494210 C4B-007 processed_transcript Homo_sapiens 0 374
ENST00000494291 C4B-010 retained_intron Homo_sapiens 0 684
ENST00000494477 C4A-010 retained_intron Homo_sapiens 0 678
ENST00000496224 C4B-008 retained_intron Homo_sapiens 0 484
ENST00000496668 C4B-009 retained_intron Homo_sapiens 0.000000000008 75
ENST00000497033 C4B-011 retained_intron Homo_sapiens 0 551
ENST00000498271 C4A-013 protein_coding Homo_sapiens 0 2935
ENST00000546399 C4B-204 protein_coding Homo_sapiens 0 2920
ENST00000546746 C4A-203 protein_coding Homo_sapiens 0 2931
ENST00000548301 C4B-203 protein_coding Homo_sapiens 0 2909
ENST00000548530 C4B-202 protein_coding Homo_sapiens 0 2937
ENST00000549812 C4A-201 protein_coding Homo_sapiens 0 2937
ENST00000550297 C4A-202 protein_coding Homo_sapiens 0 2937
ENST00000552464 C4B_2-201 protein_coding Homo_sapiens 0 2942
ENST00000616575 C4A-204 protein_coding Homo_sapiens 0 3650

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