C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class I, type 8B, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000069805 Atp8b2-001 ENSMUSG00000060671 10090 - 3:89939481-89960629 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000069805
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000069805 3.006±1.02 6.688±0.00 4.525±2.15 4.453±2.44 1.256±0.31 0.820±0.12 0.347±0.10 2.183±0.00 0.331±0.07 7.105±1.58 4.759±2.51 2.337±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064Q CIL_00064Q_0002 CGP 3:89869324-89963508

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005886 IEA plasma membrane
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IEA phospholipid translocation
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000114515 atp8b2-201 protein_coding Danio_rerio 0 996
ENSDART00000140475 atp8b2-001 protein_coding Danio_rerio 0 815
ENST00000284509 ATP8B4-201 protein_coding Homo_sapiens 0 459
ENST00000368487 ATP8B2-003 protein_coding Homo_sapiens 0 1426
ENST00000368489 ATP8B2-001 protein_coding Homo_sapiens 0 4743
ENST00000426445 ATP8B2-002 processed_transcript Homo_sapiens 0 1871
ENST00000505882 ATP8B2-006 retained_intron Homo_sapiens 0 754
ENST00000514107 ATP8B2-005 retained_intron Homo_sapiens 9e-37 156
ENST00000557955 ATP8B4-003 nonsense_mediated_decay Homo_sapiens 0 459
ENST00000558906 ATP8B4-002 nonsense_mediated_decay Homo_sapiens 0 459
ENST00000559726 ATP8B4-007 nonsense_mediated_decay Homo_sapiens 0 459
ENST00000559829 ATP8B4-001 protein_coding Homo_sapiens 0 459
ENST00000559998 ATP8B4-012 retained_intron Homo_sapiens 4e-35 152
ENST00000560161 ATP8B4-017 processed_transcript Homo_sapiens 0 231
ENST00000560479 ATP8B4-005 protein_coding Homo_sapiens 0 459
ENST00000561385 ATP8B4-004 retained_intron Homo_sapiens 0 231

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