C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: slit homolog 3 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000069837 Slit3-001 ENSMUSG00000056427 10090 + 11:35121224-35708507 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000069837
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000069837 19.711±1.04 8.647±1.38 11.826±1.06 1.778±0.40 17.642±8.87 5.145±2.94 4.381±1.16 3.541±1.23 0.092±0.06 22.083±5.56 0.893±0.46 15.682±6.66 3.022±1.17 2.786±1.56

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 TAS receptor binding
GO:0005509 IEA calcium ion binding
GO:0005615 IDA extracellular space
GO:0007411 IDA axon guidance
GO:0008285 IGI negative regulation of cell proliferation
GO:0009887 IMP organ morphogenesis
GO:0010629 IGI negative regulation of gene expression
GO:0030308 IEA negative regulation of cell growth
GO:0032870 IEA cellular response to hormone stimulus
GO:0035385 IEA Roundabout signaling pathway
GO:0048495 IEA Roundabout binding
GO:0048846 IEA axon extension involved in axon guidance
GO:0050919 IEA negative chemotaxis
GO:0051414 IEA response to cortisol
GO:0061364 IEA apoptotic process involved in luteolysis
GO:0070100 IEA negative regulation of chemokine-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332966 SLIT3-002 protein_coding Homo_sapiens 0 5734
ENST00000404867 SLIT3-201 protein_coding Homo_sapiens 0 5284
ENST00000518092 SLIT3-007 processed_transcript Homo_sapiens 0 196
ENST00000518140 SLIT3-003 retained_intron Homo_sapiens 0 1925
ENST00000519486 SLIT3-004 retained_intron Homo_sapiens 0 1242
ENST00000519560 SLIT3-001 protein_coding Homo_sapiens 0 6109
ENST00000521130 SLIT3-008 processed_transcript Homo_sapiens 0 566
ENST00000521150 SLIT3-006 retained_intron Homo_sapiens 0 1053

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