C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory (inhibitor) subunit 12A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000070663 Ppp1r12a-201 ENSMUSG00000019907 10090 + 10:108162400-108277575 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070663
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070663 16.030±2.31 3.442±0.32 161.020±26.78 9.581±3.30 4.703±0.00 9.489±2.42 3.828±2.28 2.580±0.00 4.924±1.61 5.663±2.05 0.858±0.00 14.791±5.59 9.538±4.09 2.423±1.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 ISS kinetochore
GO:0004857 ISS enzyme inhibitor activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005813 ISS centrosome
GO:0005925 IEA focal adhesion
GO:0006470 IMP protein dephosphorylation
GO:0007067 ISS mitotic nuclear division
GO:0015629 IEA actin cytoskeleton
GO:0019208 ISS phosphatase regulator activity
GO:0019901 IEA protein kinase binding
GO:0030155 ISS regulation of cell adhesion
GO:0035507 ISS regulation of myosin-light-chain-phosphatase activity
GO:0043086 ISS negative regulation of catalytic activity
GO:0043292 IEA contractile fiber
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0046822 IMP regulation of nucleocytoplasmic transport
GO:0051297 ISS centrosome organization
GO:0071889 ISS 14-3-3 protein binding
GO:0072357 ISS PTW/PP1 phosphatase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261207 PPP1R12A-201 protein_coding Homo_sapiens 0 3622
ENST00000437004 PPP1R12A-002 protein_coding Homo_sapiens 0 3415
ENST00000450142 PPP1R12A-001 protein_coding Homo_sapiens 0 3622
ENST00000546369 PPP1R12A-005 protein_coding Homo_sapiens 0 3223
ENST00000546762 PPP1R12A-015 nonsense_mediated_decay Homo_sapiens 0 712
ENST00000547131 PPP1R12A-011 protein_coding Homo_sapiens 0 702
ENST00000547253 PPP1R12A-021 retained_intron Homo_sapiens 0 233
ENST00000547330 PPP1R12A-003 protein_coding Homo_sapiens 0 2281
ENST00000548318 PPP1R12A-009 protein_coding Homo_sapiens 0 484
ENST00000548908 PPP1R12A-006 retained_intron Homo_sapiens 0 263
ENST00000550001 PPP1R12A-017 retained_intron Homo_sapiens 0 270
ENST00000550007 PPP1R12A-018 retained_intron Homo_sapiens 0 529
ENST00000550107 PPP1R12A-004 protein_coding Homo_sapiens 0 2050
ENST00000550299 PPP1R12A-019 protein_coding Homo_sapiens 0 865
ENST00000550351 PPP1R12A-020 retained_intron Homo_sapiens 0 233
ENST00000550510 PPP1R12A-008 protein_coding Homo_sapiens 0 815
ENST00000550903 PPP1R12A-014 nonsense_mediated_decay Homo_sapiens 0 405
ENST00000551191 PPP1R12A-010 retained_intron Homo_sapiens 0 381
ENST00000552892 PPP1R12A-007 retained_intron Homo_sapiens 0 230
ENST00000553081 PPP1R12A-012 protein_coding Homo_sapiens 0 839

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