C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: artemin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000070816 Artn-002 ENSMUSG00000028539 10090 - 4:117926162-117929763 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070816
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070816 0.668±0.41 0.106±0.01 1.802±0.04 0.062±0.02 0.362±0.00 0.037±0.00 0.109±0.05 0.678±0.40 0.130±0.00 0.081±0.03 0.350±0.11 0.145±0.06 1.587±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SF CIL_0008SF_0002 VISTA 4:117346906-117947610
CIL_0009B8 CIL_0009B8_0002 VISTA 4:117528714-118131599

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IPI receptor binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0007166 ISA cell surface receptor signaling pathway
GO:0007411 IDA axon guidance
GO:0007422 IMP peripheral nervous system development
GO:0008083 IEA growth factor activity
GO:0030116 ISO glial cell line-derived neurotrophic factor receptor binding
GO:0050930 IDA induction of positive chemotaxis
GO:0061146 IMP Peyer's patch morphogenesis
GO:0097021 IMP lymphocyte migration into lymphoid organs

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372354 ARTN-002 protein_coding Homo_sapiens 0 599
ENST00000372359 ARTN-001 protein_coding Homo_sapiens 0 320
ENST00000414809 ARTN-201 protein_coding Homo_sapiens 0 320
ENST00000438616 ARTN-010 protein_coding Homo_sapiens 0 507
ENST00000471394 ARTN-005 protein_coding Homo_sapiens 4.06377e-44 182
ENST00000477048 ARTN-004 protein_coding Homo_sapiens 0 243
ENST00000498139 ARTN-003 protein_coding Homo_sapiens 0 514

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