C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: artemin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028539 Artn 10090 - 4:117926162-117929763 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000070816 Artn-002 117926162-117929763 protein_coding
  ENSMUST00000097913 Artn-001 117926163-117929497 protein_coding
  ENSMUST00000133703 Artn-004 117928042-117929477 processed_transcript
  ENSMUST00000150612 Artn-003 117928144-117929413 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070816ENSMUST00000097913ENSMUST00000150612
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070816 0.668±0.41 0.106±0.01 1.802±0.04 N/A 0.062±0.02 0.362±0.00 0.037±0.00 0.109±0.05 0.678±0.40 0.130±0.00 0.081±0.03 0.350±0.11 0.145±0.06 1.587±0.17
ENSMUST00000097913 0.912±0.72 0.097±0.00 1.303±0.11 0.247±0.17 0.262±0.12 1.662±0.29 0.052±0.02 0.213±0.09 0.128±0.12 0.716±0.16 N/A 0.953±0.42 0.214±0.17 2.459±0.61
ENSMUST00000150612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.193±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SF CIL_0008SF_0002 VISTA 4:117346906-117947610
CIL_0009B8 CIL_0009B8_0002 VISTA 4:117528714-118131599

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005102 IPI receptor binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0007166 ISA cell surface receptor signaling pathway
GO:0007411 IDA axon guidance
GO:0007422 IMP peripheral nervous system development
GO:0008083 IEA growth factor activity
GO:0030116 ISO glial cell line-derived neurotrophic factor receptor binding
GO:0050930 IDA induction of positive chemotaxis
GO:0061146 IMP Peyer's patch morphogenesis
GO:0097021 IMP lymphocyte migration into lymphoid organs

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000096252 artna artemin a protein_coding Danio_rerio
ENSG00000117407 ARTN artemin protein_coding Homo_sapiens

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