C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G patch domain containing 2 like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071106 Gpatch2l-201 ENSMUSG00000021254 10090 + 12:86241890-86291414 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071106
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071106 4.866±1.13 3.430±1.23 5.961±0.01 6.161±1.86 4.558±1.79 2.703±1.51 2.450±0.51 1.791±0.52 2.480±0.99 4.595±0.43 3.008±0.80 4.652±2.50 2.761±1.08 6.063±3.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007M1 CIL_0007M1_0002 UCNEbase 12:86115809-86636147
CIL_0005O2 CIL_0005O2_0002 CGP 12:86241890-86521628

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261530 GPATCH2L-003 protein_coding Homo_sapiens 0 1288
ENST00000312858 GPATCH2L-014 protein_coding Homo_sapiens 0 1620
ENST00000554125 GPATCH2L-001 retained_intron Homo_sapiens 0 1242
ENST00000554375 GPATCH2L-004 nonsense_mediated_decay Homo_sapiens 0 1362
ENST00000556109 GPATCH2L-008 protein_coding Homo_sapiens 0 523
ENST00000556663 GPATCH2L-002 protein_coding Homo_sapiens 0 1225
ENST00000557263 GPATCH2L-005 protein_coding Homo_sapiens 0 1225
ENST00000557542 GPATCH2L-007 protein_coding Homo_sapiens 0 412
ENST00000621494 GPATCH2L-201 protein_coding Homo_sapiens 0 1602

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