C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon alpha B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071378 Ifnab-001 ENSMUSG00000100079 10090 - 4:88690302-88691359 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverPlacentaTestisENSMUST00000071378
Transcript ID Brain Liver Placenta Testis
ENSMUST00000071378 0.014±0.00 0.025±0.01 0.024±0.01 0.216±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056K CIL_00056K_000E CGP 4:88682881-88691359
CIL_00074D CIL_00074D_0002 CGP 4:88690302-88722465

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002250 IBA adaptive immune response
GO:0002286 IBA T cell activation involved in immune response
GO:0002323 IBA natural killer cell activation involved in immune response
GO:0005125 IBA cytokine activity
GO:0005132 IBA type I interferon receptor binding
GO:0005615 IBA extracellular space
GO:0006959 IBA humoral immune response
GO:0019221 IBA cytokine-mediated signaling pathway
GO:0030183 IBA B cell differentiation
GO:0033141 IBA positive regulation of peptidyl-serine phosphorylation of STAT protein
GO:0042100 IBA B cell proliferation
GO:0043330 IBA response to exogenous dsRNA
GO:0045087 IBA innate immune response
GO:0045343 IBA regulation of MHC class I biosynthetic process
GO:0051607 IEA defense response to virus

Homologs

No Homologs available.

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