C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NK6 homeobox 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071588 Nkx6-3-001 ENSMUSG00000063672 10090 + 8:23153269-23158948 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071588
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071588 0.061±0.01 0.204±0.02 0.250±0.21 0.014±0.00 0.173±0.11 0.026±0.01 0.010±0.00 0.029±0.02 0.072±0.04 0.059±0.02 0.008±0.00 0.014±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001709 IMP cell fate determination
GO:0002067 IMP glandular epithelial cell differentiation
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0030857 IMP negative regulation of epithelial cell differentiation
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295886 NKX6-1-001 protein_coding Homo_sapiens 3e-27 128
ENST00000515820 NKX6-1-002 protein_coding Homo_sapiens 2e-27 128
ENST00000518699 NKX6-3-001 protein_coding Homo_sapiens 0 948
ENST00000524115 NKX6-3-002 protein_coding Homo_sapiens 0 311

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