C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072079 Rrs1-001 ENSMUSG00000061024 10090 + 1:9545408-9547455 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072079
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072079 13.077±5.99 31.208±3.10 14.750±2.12 11.169±2.41 13.347±7.51 11.312±1.52 5.075±0.95 10.409±1.76 15.957±9.66 9.966±2.35 6.441±0.66 36.444±8.95 13.238±6.06 5.242±0.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GC CIL_0003GC_0002 CGP 1:9545408-9580673

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000794 IEA condensed nuclear chromosome
GO:0002244 IMP hematopoietic progenitor cell differentiation
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0005783 IDA endoplasmic reticulum
GO:0007080 IEA mitotic metaphase plate congression
GO:0042254 IEA ribosome biogenesis
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320270 RRS1-001 protein_coding Homo_sapiens 0 1319

Loading