C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003GC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000179041-ENSG00000147576 CGP 9606 8:66429028-66471601
GeneTranscriptPositionBiotype
ENSG00000147576 (ADHFE1)
alcohol dehydrogenase, iron containing, 1 		ENST00000276576 (ADHFE1-003) 66432499-66468807 nonsense_mediated_decay
ENST00000396621 (ADHFE1-005) 66432500-66454008 nonsense_mediated_decay
ENST00000396623 (ADHFE1-001) 66432486-66468907 protein_coding
ENST00000415254 (ADHFE1-004) 66432492-66468809 protein_coding
ENST00000419955 (ADHFE1-009) 66432513-66468809 nonsense_mediated_decay
ENST00000422166 (ADHFE1-008) 66432505-66454067 nonsense_mediated_decay
ENST00000424777 (ADHFE1-002) 66432498-66468809 nonsense_mediated_decay
ENST00000426810 (ADHFE1-006) 66432501-66468809 nonsense_mediated_decay
ENST00000431959 (ADHFE1-011) 66432505-66445414 nonsense_mediated_decay
ENST00000443372 (ADHFE1-013) 66432508-66452006 nonsense_mediated_decay
ENST00000449512 (ADHFE1-012) 66432505-66447342 nonsense_mediated_decay
ENST00000463261 (ADHFE1-014) 66432510-66444648 retained_intron
ENST00000466739 (ADHFE1-016) 66459524-66468664 processed_transcript
ENST00000466920 (ADHFE1-010) 66432505-66445249 retained_intron
ENST00000480040 (ADHFE1-015) 66454097-66471601 processed_transcript
ENST00000496501 (ADHFE1-007) 66432504-66468534 processed_transcript
ENST00000518781 (ADHFE1-017) 66439268-66444681 processed_transcript
ENST00000523113 (ADHFE1-018) 66430185-66445324 protein_coding
ENSG00000169085 (C8orf46)
chromosome 8 open reading frame 46 		ENST00000305454 (C8orf46-001) 66493208-66518524 protein_coding
ENST00000450307 (C8orf46-013) 66493562-66518498 nonsense_mediated_decay
ENST00000460144 (C8orf46-003) 66493561-66518524 nonsense_mediated_decay
ENST00000470796 (C8orf46-011) 66473784-66505468 processed_transcript
ENST00000480005 (C8orf46-006) 66493627-66514040 protein_coding
ENST00000482608 (C8orf46-009) 66460003-66513607 processed_transcript
ENST00000484919 (C8orf46-005) 66493592-66510340 retained_intron
ENST00000485639 (C8orf46-007) 66493651-66514291 processed_transcript
ENST00000488582 (C8orf46-008) 66494544-66496494 processed_transcript
ENST00000490228 (C8orf46-010) 66473878-66474939 processed_transcript
ENST00000498712 (C8orf46-012) 66471441-66474939 processed_transcript
ENST00000519702 (C8orf46-019) 66460304-66515930 processed_transcript
ENST00000521495 (C8orf46-017) 66493520-66515978 protein_coding
ENST00000521813 (C8orf46-018) 66493550-66503525 processed_transcript
ENST00000522977 (C8orf46-014) 66493606-66516818 protein_coding
ENSG00000179041 (RRS1)
RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) 		ENST00000320270 (RRS1-001) 66429028-66430733 protein_coding
CIL_0003GC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061024-ENSMUSG00000025911 CGP 10090 1:9545408-9580673
GeneTranscriptPositionBiotype
ENSMUSG00000025911 (Adhfe1)
alcohol dehydrogenase, iron containing, 1 		ENSMUST00000027044 (Adhfe1-002) 9548055-9576901 nonsense_mediated_decay
ENSMUST00000130927 (Adhfe1-003) 9548092-9553687 nonsense_mediated_decay
ENSMUST00000144177 (Adhfe1-001) 9547948-9577970 protein_coding
ENSMUST00000186467 (Adhfe1-005) 9548107-9555568 nonsense_mediated_decay
ENSMUST00000190654 (Adhfe1-004) 9548119-9580673 nonsense_mediated_decay
ENSMUSG00000061024 (Rrs1)
RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) 		ENSMUST00000072079 (Rrs1-001) 9545408-9547455 protein_coding
ENSMUSG00000079671 (2610203C22Rik)
RIKEN cDNA 2610203C22 gene 		ENSMUST00000115480 (2610203C22Rik-001) 9560832-9631092 antisense
ENSMUST00000145176 (2610203C22Rik-003) 9563505-9631137 retained_intron
ENSMUST00000148310 (2610203C22Rik-005) 9603435-9631164 antisense
ENSMUST00000148585 (2610203C22Rik-002) 9600413-9631144 antisense
ENSMUST00000153239 (2610203C22Rik-004) 9601018-9631175 antisense
ENSMUSG00000081441 (Gm6161)
predicted gene 6161 		ENSMUST00000121942 (Gm6161-001) 9574548-9575649 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003GC_0001ENSG00000147576ENST00000276576ENST00000396623ENST00000419955ENST00000424777ENST00000426810ENST00000466739ENST00000466920ENST00000480040ENST00000496501ENSG00000169085ENST00000305454ENST00000450307ENST00000460144ENSG00000179041ENST00000320270CIL_0003GC_0002ENSMUSG00000025911ENSMUST00000027044ENSMUST00000144177ENSMUST00000190654ENSMUSG00000061024ENSMUST00000072079ENSMUSG00000079671ENSMUST00000115480ENSMUST00000145176ENSMUSG00000081441ENSMUST00000121942
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147576 ENST00000276576 N/A N/A N/A N/A 4.205±0.00 N/A 11.868±0.00 N/A 4.128±0.00 N/A 7.479±0.00 3.048±0.00 5.544±0.00 2.129±0.00
ENST00000396621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396623 N/A N/A N/A N/A N/A N/A 1.299±0.00 2.270±0.00 N/A N/A N/A N/A N/A N/A
ENST00000415254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.858±1.05 1.375±0.00
ENST00000422166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424777 N/A N/A N/A N/A N/A N/A 0.592±0.00 N/A 3.455±0.00 N/A 4.384±0.00 2.413±0.00 N/A N/A
ENST00000426810 N/A N/A N/A N/A N/A N/A N/A 2.307±0.00 N/A N/A N/A 3.230±0.00 2.257±0.00 1.411±0.00
ENST00000431959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.684±0.00 N/A N/A
ENST00000466920 N/A N/A N/A N/A N/A N/A 1.643±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000480040 N/A N/A N/A N/A 2.872±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.924±0.00 N/A N/A 2.601±0.00
ENST00000518781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169085 ENST00000305454 N/A N/A N/A 21.564±9.39 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450307 N/A N/A N/A N/A N/A 1.255±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460144 N/A N/A 1.149±0.00 9.093±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000179041 ENST00000320270 16.055±0.00 19.359±0.00 4.205±0.00 N/A 6.297±5.26 7.835±6.45 6.841±6.35 7.576±5.89 9.636±7.06 5.414±4.05 16.690±14.96 16.795±16.09 10.411±2.31 7.605±4.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025911 ENSMUST00000027044 72.340±38.00 43.514±11.30 5.940±0.09 N/A 40.921±8.39 1.086±0.35 27.032±7.48 115.320±16.01 31.777±22.07 4.219±1.25 10.109±1.80 10.156±2.95 2.240±2.44 1.912±0.33
ENSMUST00000130927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144177 5.080±0.00 N/A 1.481±0.04 N/A 5.586±0.03 0.319±0.05 3.666±0.78 12.596±0.86 4.376±2.32 1.285±0.04 N/A 1.884±0.39 0.723±0.00 N/A
ENSMUST00000186467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190654 N/A N/A 0.969±0.00 N/A 8.890±0.00 0.518±0.14 5.153±0.23 N/A N/A N/A 6.826±1.55 4.458±2.12 0.531±0.40 N/A
ENSMUSG00000061024 ENSMUST00000072079 13.077±5.99 31.208±3.10 14.750±2.12 11.169±2.41 13.347±7.51 11.312±1.52 5.075±0.95 10.409±1.76 15.957±9.66 9.966±2.35 6.441±0.66 36.444±8.95 13.238±6.06 5.242±0.66
ENSMUSG00000079671 ENSMUST00000115480 N/A N/A N/A N/A N/A 0.938±0.00 N/A N/A N/A N/A N/A N/A 0.373±0.08 N/A
ENSMUST00000145176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.186±0.00 N/A
ENSMUST00000148310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081441 ENSMUST00000121942 0.136±0.02 N/A 1.277±0.12 1.220±0.05 0.084±0.00 0.160±0.00 0.062±0.02 0.116±0.05 1.029±1.83 0.119±0.02 0.060±0.04 0.151±0.11 0.058±0.02 0.279±0.00

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