C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10146
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072739 Gm10146-201 ENSMUSG00000064317 10090 + 10:78393309-78393756 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072739
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072739 12.636±4.29 4.156±1.10 9.170±0.45 31.896±8.20 5.680±2.58 4.288±1.64 3.588±0.46 3.030±0.69 16.012±20.22 3.688±0.52 0.370±0.17 15.237±7.37 6.518±3.16 2.885±0.68

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005681 IEA spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252622 LSM7-001 protein_coding Homo_sapiens 0 372
ENST00000585395 LSM7-003 nonsense_mediated_decay Homo_sapiens 0 252
ENST00000585409 LSM7-007 protein_coding Homo_sapiens 0 346
ENST00000587502 LSM7-002 protein_coding Homo_sapiens 0 348
ENST00000589532 LSM7-004 processed_transcript Homo_sapiens 0 259
ENST00000591515 LSM7-005 retained_intron Homo_sapiens 0 261

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