C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: non-SMC condensin II complex, subunit D3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000073127 Ncapd3-201 ENSMUSG00000035024 10090 + 9:27030175-27095311 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073127
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073127 5.741±1.57 5.116±2.33 6.876±1.87 7.700±3.55 5.531±2.30 4.066±1.79 2.900±0.35 3.190±0.77 8.358±6.92 4.586±1.18 1.757±0.71 7.726±2.61 4.731±2.58 5.169±1.70

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000793 IDA condensed chromosome
GO:0005515 IEA protein binding
GO:0007076 IEA mitotic chromosome condensation
GO:0016020 IEA membrane
GO:0031618 IEA nuclear pericentric heterochromatin
GO:0035064 IEA methylated histone binding
GO:0042585 IDA germinal vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000525964 NCAPD3-003 nonsense_mediated_decay Homo_sapiens 0 1303
ENST00000527944 NCAPD3-013 protein_coding Homo_sapiens 0 455
ENST00000530396 NCAPD3-012 protein_coding Homo_sapiens 0 942
ENST00000534532 NCAPD3-002 nonsense_mediated_decay Homo_sapiens 0 1471
ENST00000534548 NCAPD3-001 protein_coding Homo_sapiens 0 2049

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