C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: non-SMC condensin II complex, subunit D3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000534548 NCAPD3-001 ENSG00000151503 9606 - 11:134152445-134223991 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartKidneyLiverMuscleOvaryENST00000534548
Transcript ID Adrenal Bladder Breast Colon Heart Kidney Liver Muscle Ovary
ENST00000534548 4.132±0.00 1.718±0.00 3.130±0.31 4.576±0.00 3.023±0.00 2.569±0.79 1.778±0.00 1.556±0.00 6.752±1.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004R4 CIL_0004R4_0003 CGP 11:133908564-134152001

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000793 IEA condensed chromosome
GO:0000799 IDA:IEA nuclear condensin complex
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0007076 IEA:IDA mitotic chromosome condensation
GO:0016020 IDA membrane
GO:0031618 IDA nuclear pericentric heterochromatin
GO:0035064 IDA methylated histone binding
GO:0042585 IEA germinal vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073127 Ncapd3-201 protein_coding Mus_musculus 0 2049
ENSMUST00000086198 Ncapd3-202 protein_coding Mus_musculus 0 1829

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