C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chemokine (C-X-C motif) ligand 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074040 Cxcl17-201 ENSMUSG00000060188 10090 - 7:25400053-25412886 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074040
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074040 6.794±6.79 0.070±0.02 0.041±0.01 2.648±0.88 0.149±0.05 2.478±1.73 0.073±0.04 0.011±0.00 25.344±5.26 0.093±0.00 4.616±2.16 0.064±0.05 0.128±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TR CIL_0008TR_0002 VISTA 7:25324415-25925712
CIL_00053L CIL_00053L_0002 CGP 7:25400053-25477625

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341918 CXCL17-002 nonsense_mediated_decay Homo_sapiens 0 222
ENST00000601181 CXCL17-001 protein_coding Homo_sapiens 0 289

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