C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 4, sodium bicarbonate cotransporter, member 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074298 Slc4a9-201 ENSMUSG00000024485 10090 + 18:36528157-36541293 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000074298
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000074298 0.009±0.00 0.024±0.01 0.010±0.00 0.025±0.01 0.057±0.02 0.053±0.00 5.712±0.86 0.081±0.03 0.025±0.00 0.061±0.02 0.022±0.00 0.032±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZL CIL_0006ZL_0002 CGP 18:36504929-36541293
CIL_0006ZO CIL_0006ZO_0002 CGP 18:36528157-36665917

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005452 IEA inorganic anion exchanger activity
GO:0006820 IEA anion transport
GO:0016021 IEA integral component of membrane
GO:0045177 IDA apical part of cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000432095 SLC4A9-004 protein_coding Homo_sapiens 0 1628
ENST00000504742 SLC4A9-005 retained_intron Homo_sapiens 0 361
ENST00000506545 SLC4A9-003 protein_coding Homo_sapiens 0 1170
ENST00000506757 SLC4A9-001 protein_coding Homo_sapiens 0 1635
ENST00000507527 SLC4A9-002 protein_coding Homo_sapiens 0 1635
ENST00000514849 SLC4A9-006 retained_intron Homo_sapiens 0 490

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