C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxysterol binding protein-like 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074352 Osbpl1a-001 ENSMUSG00000044252 10090 - 18:12755314-12941841 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000074352
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000074352 1.036±0.00 2.864±0.58 4.391±0.78 1.700±0.00 0.716±0.00 1.876±0.36 4.332±1.85 1.186±0.19 2.043±0.76 2.520±1.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WS CIL_0005WS_0002 CGP 18:12741324-12941841
CIL_0005WR CIL_0005WR_0002 CGP 18:12755314-12992948

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005770 ISS late endosome
GO:0006869 IEA lipid transport
GO:0008150 ND biological_process
GO:0015485 IEA cholesterol binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000075837 OSBPL1A (2 of 2)-201 protein_coding Danio_rerio 0 431
ENST00000319481 OSBPL1A-001 protein_coding Homo_sapiens 0 3422
ENST00000357041 OSBPL1A-003 protein_coding Homo_sapiens 0 2220
ENST00000399441 OSBPL1A-005 protein_coding Homo_sapiens 0 318
ENST00000399443 OSBPL1A-002 protein_coding Homo_sapiens 0 2037
ENST00000578013 OSBPL1A-017 protein_coding Homo_sapiens 0 1038
ENST00000578055 OSBPL1A-015 nonsense_mediated_decay Homo_sapiens 6e-38 161
ENST00000578091 OSBPL1A-004 nonsense_mediated_decay Homo_sapiens 0 1070
ENST00000579851 OSBPL1A-009 nonsense_mediated_decay Homo_sapiens 0 1077
ENST00000581043 OSBPL1A-013 processed_transcript Homo_sapiens 1e-20 104
ENST00000581343 OSBPL1A-008 retained_intron Homo_sapiens 0 237
ENST00000582350 OSBPL1A-011 processed_transcript Homo_sapiens 0 318
ENST00000582618 OSBPL1A-007 processed_transcript Homo_sapiens 0 222
ENST00000582645 OSBPL1A-010 nonsense_mediated_decay Homo_sapiens 0 322
ENST00000584119 OSBPL1A-014 nonsense_mediated_decay Homo_sapiens 0 414

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