C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lethal, Chr 7, Rinchik 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075010 l7Rn6-006 ENSMUSG00000062797 10090 - 7:89918920-89941084 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverOvaryPlacentaTestisENSMUST00000075010
Transcript ID Adipose Brain Breast Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000075010 4.819±0.59 5.248±0.11 9.382±3.53 5.381±0.98 4.983±1.26 3.375±0.97 3.414±0.91 6.275±3.51 2.048±0.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073O CIL_00073O_0002 CGP 7:89917529-89980983

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 ISS intracellular
GO:0005634 ISS nucleus
GO:0005737 IDA cytoplasm
GO:0005829 ISS cytosol
GO:0006606 ISS protein import into nucleus
GO:0007030 IMP Golgi organization
GO:0008565 ISS protein transporter activity
GO:0015031 ISS protein transport
GO:0030324 IMP lung development
GO:0030544 ISS Hsp70 protein binding
GO:0034605 ISS cellular response to heat

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278483 C11orf73-001 protein_coding Homo_sapiens 0 848
ENST00000445047 RP11-654E17.2-001 processed_pseudogene Homo_sapiens 0 510
ENST00000528004 C11orf73-004 nonsense_mediated_decay Homo_sapiens 0 388
ENST00000529405 C11orf73-008 retained_intron Homo_sapiens 0 303
ENST00000530208 C11orf73-003 processed_transcript Homo_sapiens 0 728
ENST00000531485 C11orf73-006 processed_transcript Homo_sapiens 0 468
ENST00000532270 C11orf73-007 processed_transcript Homo_sapiens 0 525
ENST00000533986 C11orf73-002 protein_coding Homo_sapiens 0 737
ENST00000590455 AC007229.3-001 processed_pseudogene Homo_sapiens 1e-33 147
ENST00000618164 C11orf73-201 protein_coding Homo_sapiens 0 688

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