C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: minichromosome maintenance complex component 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075540 Mcm9-201 ENSMUSG00000058298 10090 - 10:53536329-53630439 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075540
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075540 1.479±0.87 1.138±0.42 1.812±0.18 0.708±0.46 0.957±0.37 2.448±0.78 0.094±0.00 0.796±0.30 0.979±0.70 0.992±0.29 0.133±0.05 2.355±1.07 1.389±0.29 1.232±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000991 CIL_000991_0002 VISTA 10:53043568-53644849
CIL_0005OT CIL_0005OT_0002 CGP 10:53536329-53630439

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000724 IMP double-strand break repair via homologous recombination
GO:0003677 IEA DNA binding
GO:0004386 IEA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0007276 IMP gamete generation
GO:0007292 IMP female gamete generation
GO:0097362 IDA MCM8-MCM9 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316068 MCM9-001 protein_coding Homo_sapiens 0 1341
ENST00000316316 MCM9-002 protein_coding Homo_sapiens 0 2344
ENST00000368478 MCM9-007 processed_transcript Homo_sapiens 0 296
ENST00000425154 MCM9-004 protein_coding Homo_sapiens 0 564
ENST00000436788 MCM9-003 retained_intron Homo_sapiens 0 379
ENST00000458674 MCM9-008 protein_coding Homo_sapiens 0 294
ENST00000505485 MCM9-006 processed_transcript Homo_sapiens 0 634
ENST00000619706 MCM9-201 protein_coding Homo_sapiens 0 2344

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