C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: jagged 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075827 Jag2-201 ENSMUSG00000002799 10090 - 12:112908590-112929495 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderColonLiverMuscleOvaryPlacentaTestisENSMUST00000075827
Transcript ID Adipose Adrenal Bladder Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000075827 6.351±0.00 4.036±0.95 4.172±0.00 2.541±0.64 0.076±0.08 2.888±0.38 5.034±3.25 2.846±2.23 1.298±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NL CIL_0006NL_0002 CGP 12:112850876-112929495
CIL_0001JY CIL_0001JY_0002 CGP 12:112908590-112942118

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 IMP skeletal system development
GO:0001701 IMP in utero embryonic development
GO:0001709 NAS cell fate determination
GO:0003016 IMP respiratory system process
GO:0005112 IEA Notch binding
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0007219 IEA Notch signaling pathway
GO:0007283 IEA spermatogenesis
GO:0007605 NAS sensory perception of sound
GO:0008083 ISS growth factor activity
GO:0009912 IMP auditory receptor cell fate commitment
GO:0016020 IDA membrane
GO:0016331 IMP morphogenesis of embryonic epithelium
GO:0030154 IEA cell differentiation
GO:0030155 IMP regulation of cell adhesion
GO:0030217 IEA T cell differentiation
GO:0042127 ISS regulation of cell proliferation
GO:0042475 IMP odontogenesis of dentin-containing tooth
GO:0042492 IMP gamma-delta T cell differentiation
GO:0045061 ISS thymic T cell selection
GO:1990134 IMP epithelial cell apoptotic process involved in palatal shelf morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331782 JAG2-001 protein_coding Homo_sapiens 0 4399
ENST00000347004 JAG2-002 protein_coding Homo_sapiens 0 2488
ENST00000546616 JAG2-003 retained_intron Homo_sapiens 0 1242
ENST00000553051 JAG2-004 retained_intron Homo_sapiens 0 931
ENST00000553244 JAG2-005 retained_intron Homo_sapiens 0 446

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