C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cullin-associated and neddylation-dissociated 2 (putative)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075995 Cand2-001 ENSMUSG00000030319 10090 + 6:115774538-115804893 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075995
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075995 3.198±2.22 7.948±1.20 3.371±0.19 7.054±5.32 4.802±2.38 2.306±0.20 22.115±2.06 1.615±0.29 1.198±1.23 3.141±0.49 12.825±2.14 9.639±2.34 8.388±2.40 2.557±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SD CIL_0005SD_0002 CGP 6:115729131-115804893
CIL_00051A CIL_00051A_0002 CGP 6:115774538-115808747

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0017025 IDA TBP-class protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000003694 cand1-001 protein_coding Danio_rerio 0.00000000002 77
ENST00000295989 CAND2-001 protein_coding Homo_sapiens 0 2553
ENST00000446928 CAND2-004 nonsense_mediated_decay Homo_sapiens 0 302
ENST00000454887 CAND2-006 protein_coding Homo_sapiens 0 329
ENST00000456430 CAND2-002 protein_coding Homo_sapiens 0 3969
ENST00000466558 CAND2-005 processed_transcript Homo_sapiens 0 462

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