C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 16B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076236 Lrrc16b-201 ENSMUSG00000022211 10090 + 14:55491093-55508246 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076236
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076236 0.422±0.23 0.794±0.09 0.353±0.09 30.608±12.96 0.381±0.17 0.343±0.17 0.572±0.19 0.523±0.14 0.404±0.44 0.339±0.10 0.099±0.04 4.332±1.41 0.325±0.16 0.262±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031I CIL_00031I_0002 CGP 14:55478758-55508246
CIL_00031H CIL_00031H_0002 CGP 14:55491093-55517431

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342740 LRRC16B-001 protein_coding Homo_sapiens 0 5483
ENST00000559694 LRRC16B-003 retained_intron Homo_sapiens 0 1421
ENST00000560349 LRRC16B-002 retained_intron Homo_sapiens 0 889
ENST00000561354 LRRC16B-004 retained_intron Homo_sapiens 0 416

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