C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00031H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186648-ENSG00000100884 CGP 9606 14:24052000-24078100
GeneTranscriptPositionBiotype
ENSG00000100884 (CPNE6)
copine VI (neuronal) 		ENST00000397016 (CPNE6-003) 24070837-24078100 protein_coding
ENST00000460657 (CPNE6-002) 24071589-24078086 retained_intron
ENST00000537691 (CPNE6-201) 24070837-24078098 protein_coding
ENST00000557829 (CPNE6-006) 24075558-24078087 retained_intron
ENST00000557889 (CPNE6-017) 24071187-24073094 protein_coding
ENST00000558450 (CPNE6-014) 24070897-24074095 protein_coding
ENST00000558541 (CPNE6-018) 24071360-24075177 protein_coding
ENST00000558795 (CPNE6-005) 24071562-24075511 nonsense_mediated_decay
ENST00000558859 (CPNE6-011) 24071522-24074726 protein_coding
ENST00000558995 (CPNE6-004) 24070949-24078086 retained_intron
ENST00000559197 (CPNE6-019) 24071532-24074311 protein_coding
ENST00000559207 (CPNE6-013) 24071581-24075584 protein_coding
ENST00000559778 (CPNE6-016) 24071017-24073647 protein_coding
ENST00000560092 (CPNE6-008) 24071525-24074301 processed_transcript
ENST00000560356 (CPNE6-015) 24070848-24074125 protein_coding
ENST00000560761 (CPNE6-010) 24071090-24074314 protein_coding
ENST00000560828 (CPNE6-009) 24071532-24074582 protein_coding
ENST00000560845 (CPNE6-007) 24075831-24076840 retained_intron
ENST00000560884 (CPNE6-012) 24071550-24074311 protein_coding
ENSG00000186648 (LRRC16B)
leucine rich repeat containing 16B 		ENST00000342740 (LRRC16B-001) 24052000-24069728 protein_coding
ENST00000559694 (LRRC16B-003) 24057215-24069726 retained_intron
ENST00000560349 (LRRC16B-002) 24061919-24069724 retained_intron
ENST00000561354 (LRRC16B-004) 24060741-24061930 retained_intron
CIL_00031H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022211-ENSMUSG00000022212 CGP 10090 14:55491093-55517431
GeneTranscriptPositionBiotype
ENSMUSG00000022211 (Lrrc16b)
leucine rich repeat containing 16B 		ENSMUST00000076236 (Lrrc16b-201) 55491093-55508246 protein_coding
ENSMUSG00000022212 (Cpne6)
copine VI 		ENSMUST00000074225 (Cpne6-001) 55510448-55517431 protein_coding
ENSMUST00000163767 (Cpne6-005) 55511360-55517431 protein_coding
ENSMUST00000165262 (Cpne6-003) 55510445-55517431 protein_coding
ENSMUST00000165725 (Cpne6-006) 55510597-55513692 nonsense_mediated_decay
ENSMUST00000169869 (Cpne6-004) 55511311-55517431 retained_intron
ENSMUST00000170155 (Cpne6-002) 55510475-55517430 retained_intron
ENSMUST00000171643 (Cpne6-007) 55511985-55517429 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00031H_0001ENSG00000100884ENST00000397016ENST00000460657ENST00000537691ENST00000557829ENST00000557889ENST00000558450ENST00000558541ENST00000558795ENST00000558859ENST00000558995ENST00000559197ENST00000559207ENST00000559778ENST00000560092ENST00000560356ENST00000560761ENST00000560828ENST00000560845ENST00000560884ENSG00000186648ENST00000342740ENST00000559694ENST00000560349ENST00000561354CIL_00031H_0002ENSMUSG00000022211ENSMUST00000076236ENSMUSG00000022212ENSMUST00000074225ENSMUST00000163767ENSMUST00000165262ENSMUST00000165725ENSMUST00000169869ENSMUST00000170155ENSMUST00000171643
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00031H_0001ENSG00000100884ENST00000397016ENST00000460657ENST00000537691ENST00000557829ENST00000557889ENST00000558450ENST00000558795ENST00000558859ENST00000558995ENST00000559207ENST00000560092ENST00000560845ENSG00000186648ENST00000342740ENST00000559694ENST00000560349ENST00000561354CIL_00031H_0002ENSMUSG00000022211ENSMUST00000076236ENSMUSG00000022212ENSMUST00000074225ENSMUST00000163767ENSMUST00000165262ENSMUST00000165725ENSMUST00000169869ENSMUST00000170155ENSMUST00000171643
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100884 ENST00000397016 N/A N/A N/A 4.655±0.00 N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 0.018±0.00 N/A
ENST00000460657 N/A N/A N/A N/A N/A N/A 0.010±0.00 0.451±0.00 N/A N/A N/A N/A N/A N/A
ENST00000537691 N/A N/A N/A 27.396±0.00 N/A N/A N/A 1.719±0.00 N/A N/A N/A 0.059±0.00 0.018±0.00 N/A
ENST00000557829 N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A 0.044±0.00 N/A 0.197±0.00
ENST00000557889 N/A N/A N/A N/A 0.267±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558450 N/A N/A N/A N/A N/A N/A N/A 0.628±0.00 0.442±0.00 N/A N/A N/A N/A N/A
ENST00000558541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558795 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A
ENST00000558859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.116±0.00 N/A N/A
ENST00000558995 N/A N/A N/A N/A N/A N/A N/A 0.298±0.00 0.089±0.00 N/A N/A N/A N/A N/A
ENST00000559197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559207 N/A 0.034±0.00 1.212±0.00 N/A N/A 0.155±0.00 N/A 1.027±0.00 N/A N/A N/A N/A N/A 0.204±0.00
ENST00000559778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560092 N/A N/A N/A N/A 0.108±0.00 N/A N/A N/A 0.579±0.00 N/A 0.149±0.00 N/A N/A N/A
ENST00000560356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560845 0.276±0.00 N/A N/A N/A N/A N/A 0.152±0.00 N/A 0.343±0.22 N/A N/A N/A 0.069±0.00 N/A
ENST00000560884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000186648 ENST00000342740 0.043±0.00 0.135±0.00 N/A 0.368±0.00 N/A 0.113±0.00 N/A N/A 0.032±0.00 N/A N/A 0.141±0.10 0.061±0.02 1.477±0.21
ENST00000559694 N/A 0.079±0.00 N/A 0.170±0.00 N/A N/A 0.027±0.00 N/A N/A N/A N/A 0.116±0.09 0.023±0.00 0.289±0.00
ENST00000560349 N/A 0.157±0.00 N/A 0.269±0.00 N/A 0.017±0.00 N/A N/A N/A 0.032±0.00 N/A N/A 0.040±0.02 N/A
ENST00000561354 N/A N/A N/A 0.475±0.00 0.286±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.484±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022211 ENSMUST00000076236 0.422±0.23 0.794±0.09 0.353±0.09 30.608±12.96 0.381±0.17 0.343±0.17 0.572±0.19 0.523±0.14 0.404±0.44 0.339±0.10 0.099±0.04 4.332±1.41 0.325±0.16 0.262±0.06
ENSMUSG00000022212 ENSMUST00000074225 N/A N/A 0.278±0.05 0.650±0.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163767 N/A N/A 0.600±0.00 19.571±26.90 0.028±0.00 0.058±0.00 0.020±0.00 N/A 0.040±0.01 0.004±0.00 0.037±0.01 0.138±0.05 N/A 0.041±0.03
ENSMUST00000165262 N/A N/A N/A 14.217±0.00 N/A 0.106±0.05 N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A
ENSMUST00000165725 N/A 0.065±0.01 N/A N/A N/A 0.110±0.00 N/A N/A N/A N/A N/A N/A 0.022±0.00 0.018±0.00
ENSMUST00000169869 0.036±0.02 N/A 0.212±0.00 N/A 0.023±0.00 0.113±0.06 N/A 0.038±0.00 0.044±0.03 N/A 0.052±0.00 0.047±0.00 0.004±0.00 N/A
ENSMUST00000170155 0.020±0.01 0.030±0.02 0.200±0.00 3.255±3.63 0.005±0.00 0.022±0.01 0.012±0.00 0.031±0.00 0.006±0.00 0.010±0.00 0.033±0.02 0.039±0.03 N/A 0.057±0.04
ENSMUST00000171643 0.076±0.00 0.148±0.06 N/A 0.597±0.19 0.021±0.01 0.074±0.05 0.063±0.03 0.058±0.01 0.021±0.01 0.026±0.01 N/A 0.089±0.03 N/A N/A

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